RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 HDAC8Q9BY41 377 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 WWTR1Q9GZV5 400 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 B3GAT1Q9P2W7 334 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 NCDNQ9UBB6 729 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 SERTAD3Q9UJW9 196 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 AMDHD2Q9Y303 409 aa5.99□□□□□ -1.45
ZNF540-201ENST00000316433 RBM7Q9Y580 266 aaKnown RBP5.99□□□□□ -1.45
ZNF540-201ENST00000316433 SIRT4Q9Y6E7 314 aaPredicted RBP5.99□□□□□ -1.45
ZNF540-201ENST00000316433 ACOT7O00154 380 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 SPINT1O43278 529 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 GPRIN2O60269 458 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 PPP1R3DO95685 299 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 LCATP04180 440 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 OR8U9P0C7N5 309 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 GIMD1P0DJR0 217 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 EPCAMP16422 314 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 RAB6AP20340 208 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 MMP11P24347 488 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 P2RX1P51575 399 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 TAS2R38P59533 333 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 C17orf67Q0P5P2 114 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 EIPR1Q53HC9 387 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 ZNF343Q6P1L6 599 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 AGBL5Q8NDL9 886 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 TMEM104Q8NE00 496 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 OR14L1PQ8NHC6 308 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 NEIL2Q969S2 332 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 WBP2Q969T9 261 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 TMEM19Q96HH6 336 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 OR8B4Q96RC9 309 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 SLC22A12Q96S37 553 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 GPX7Q96SL4 187 aaPredicted RBP5.98□□□□□ -1.45
ZNF540-201ENST00000316433 ARV1Q9H2C2 271 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 C1orf198Q9H425 327 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 PARP11Q9NR21 331 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 SLC17A5Q9NRA2 495 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 SLC2A8Q9NY64 477 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 FARSAQ9Y285 508 aaKnown RBP5.98□□□□□ -1.45
ZNF540-201ENST00000316433 GOLGB1Q14789 3259 aaKnown RBP5.98□□□□□ -1.45
ZNF540-201ENST00000316433 CKAP5Q14008 2032 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 LOC100509620A0A075B734 347 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 A0A087WV62 115 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 TGIF2-C20orf24A0A0A6YYL0 155 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 BLACEA4D250 179 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 ELOA3DA6NLF2 546 aaPredicted RBP5.98□□□□□ -1.45
ZNF540-201ENST00000316433 FLRT2O43155 660 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 ZNF208O43345 1280 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 DCNP07585 359 aaKnown RBP5.98□□□□□ -1.45
ZNF540-201ENST00000316433 AQP2P41181 271 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 CEBPGP53567 150 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 FUT5Q11128 374 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 SHHQ15465 462 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 SYPL1Q16563 259 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 PRSS53Q2L4Q9 553 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 PGGHGQ32M88 737 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 DMKNQ6E0U4 476 aaPredicted RBP5.98□□□□□ -1.45
ZNF540-201ENST00000316433 MTSS1LQ765P7 747 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 MYPOPQ86VE0 399 aaPredicted RBP5.98□□□□□ -1.45
ZNF540-201ENST00000316433 GKN2Q86XP6 184 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 MRPL41Q8IXM3 137 aaKnown RBP5.98□□□□□ -1.45
ZNF540-201ENST00000316433 C1orf87Q8N0U7 546 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 CLDN19Q8N6F1 224 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 PLPP5Q8NEB5 264 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 TOMM40LQ969M1 308 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 SEC22AQ96IW7 307 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 SLC35E1Q96K37 410 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 JSRP1Q96MG2 331 aaPredicted RBP5.98□□□□□ -1.45
ZNF540-201ENST00000316433 STACQ99469 402 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 CHST6Q9GZX3 395 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 AURKAIP1Q9NWT8 199 aaPredicted RBP5.98□□□□□ -1.45
ZNF540-201ENST00000316433 OBP2AQ9NY56 170 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 IL36AQ9UHA7 158 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 POLR3KQ9Y2Y1 108 aaPredicted RBP5.98□□□□□ -1.45
ZNF540-201ENST00000316433 CLDN16Q9Y5I7 305 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 ETV7Q9Y603 341 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 TCF20Q9UGU0 1960 aaKnown RBP5.98□□□□□ -1.45
ZNF540-201ENST00000316433 NOTCH4Q99466 2003 aa5.98□□□□□ -1.45
ZNF540-201ENST00000316433 GXYLT2A0PJZ3 443 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 A8MVM7 634 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 VSTM5A8MXK1 200 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 GEMIN2O14893 280 aaKnown RBP5.97□□□□□ -1.45
ZNF540-201ENST00000316433 B4GALT2O60909 372 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 IL3P08700 152 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 HOXB2P14652 356 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 RGS8P57771 180 aaPredicted RBP5.97□□□□□ -1.45
ZNF540-201ENST00000316433 UBE2KP61086 200 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 SMAD3P84022 425 aaKnown RBP5.97□□□□□ -1.45
ZNF540-201ENST00000316433 ZXDBP98169 803 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 ST3GAL3Q11203 375 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 ARL6IP1Q15041 203 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 ZNF77Q15935 545 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 C4orf17Q53FE4 359 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 PODNL1Q6PEZ8 512 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 OR51G2Q8NGK0 314 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 OR4C16Q8NGL9 310 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 OR13C5Q8NGS8 318 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 OR13C2Q8NGS9 318 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 OR5K2Q8NHB8 316 aa5.97□□□□□ -1.45
ZNF540-201ENST00000316433 SLC25A43Q8WUT9 341 aaPredicted RBP5.97□□□□□ -1.45
ZNF540-201ENST00000316433 KISS1RQ969F8 398 aaPredicted RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms