RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 TAF13Q15543 124 aa12.08□□□□□ -0.47
NEK3-205ENST00000610828 HIST3H3Q16695 136 aa12.08□□□□□ -0.47
NEK3-205ENST00000610828 ELMOD2Q8IZ81 293 aa12.08□□□□□ -0.47
NEK3-205ENST00000610828 OR6M1Q8NGM8 313 aa12.08□□□□□ -0.47
NEK3-205ENST00000610828 SLC25A28Q96A46 364 aa12.08□□□□□ -0.47
NEK3-205ENST00000610828 SGCZQ96LD1 299 aa12.08□□□□□ -0.47
NEK3-205ENST00000610828 OR2M2Q96R28 347 aa12.08□□□□□ -0.47
NEK3-205ENST00000610828 UCN2Q96RP3 112 aa12.08□□□□□ -0.47
NEK3-205ENST00000610828 MEGF11A6BM72 1044 aa12.08□□□□□ -0.48
NEK3-205ENST00000610828 A6NL46 340 aa12.08□□□□□ -0.48
NEK3-205ENST00000610828 RGS13O14921 159 aa12.08□□□□□ -0.48
NEK3-205ENST00000610828 RER1O15258 196 aa12.08□□□□□ -0.48
NEK3-205ENST00000610828 EIF1BO60739 113 aaKnown RBP12.08□□□□□ -0.48
NEK3-205ENST00000610828 RBBP9O75884 186 aa12.08□□□□□ -0.48
NEK3-205ENST00000610828 TPPPO94811 219 aa12.08□□□□□ -0.48
NEK3-205ENST00000610828 P04436 131 aa12.08□□□□□ -0.48
NEK3-205ENST00000610828 PRKXP51817 358 aa12.08□□□□□ -0.48
NEK3-205ENST00000610828 RAG2P55895 527 aa12.08□□□□□ -0.48
NEK3-205ENST00000610828 ANGPT1Q15389 498 aa12.08□□□□□ -0.48
NEK3-205ENST00000610828 PCGF3Q3KNV8 242 aa12.08□□□□□ -0.48
NEK3-205ENST00000610828 ARMC10Q8N2F6 343 aa12.08□□□□□ -0.48
NEK3-205ENST00000610828 OR11H7Q8NGC8 314 aa12.08□□□□□ -0.48
NEK3-205ENST00000610828 OR10A4Q9H209 315 aa12.08□□□□□ -0.48
NEK3-205ENST00000610828 ZNF275Q9NSD4 429 aaPredicted RBP12.08□□□□□ -0.48
NEK3-205ENST00000610828 MYEF2Q9P2K5 600 aaKnown RBP12.08□□□□□ -0.48
NEK3-205ENST00000610828 ZNF222Q9UK12 451 aa12.08□□□□□ -0.48
NEK3-205ENST00000610828 FARSAQ9Y285 508 aaKnown RBP12.08□□□□□ -0.48
NEK3-205ENST00000610828 A0A0G2JMM0 328 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 A0A1W2PPB8 328 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 A0A1W2PRS3 328 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 CIB4A0PJX0 185 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 KIR3DP1A8MWS1 328 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 NPIPA2E9PIF3 369 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 NPIPA3F8WFD2 350 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 TNFSF11O14788 317 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 PEX14O75381 377 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 ALDOBP05062 364 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 VEGFCP49767 419 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 SSPNQ14714 243 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 ST3GAL2Q16842 350 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 ZNF528Q3MIS6 628 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 ASCC1Q8N9N2 400 aaKnown RBP12.07□□□□□ -0.48
NEK3-205ENST00000610828 OR6N1Q8NGY5 312 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 NTNG2Q96CW9 530 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 TMEM41AQ96HV5 264 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 ZNF385AQ96PM9 386 aaKnown RBP12.07□□□□□ -0.48
NEK3-205ENST00000610828 TAAR9Q96RI9 348 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 PIGQQ9BRB3 760 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 ZPBPQ9BS86 351 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 SLC17A5Q9NRA2 495 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 STMN3Q9NZ72 180 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 GLTPQ9NZD2 209 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 MEIS3P1A6NDR6 274 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 H7C417 338 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 WDPCPO95876 746 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 SLC2A1P11166 492 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 CSNK1A1P48729 337 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 PSMA6P60900 246 aaKnown RBP12.07□□□□□ -0.48
NEK3-205ENST00000610828 CSNK2A1P68400 391 aaPredicted RBP12.07□□□□□ -0.48
NEK3-205ENST00000610828 GUCA2AQ02747 115 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 ELFN2Q5R3F8 820 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 CD276Q5ZPR3 534 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 OLFML2AQ68BL7 652 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 DNM1P46Q6ZS02 220 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 CREB3L2Q70SY1 520 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 COMMD2Q86X83 199 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 ESX1Q8N693 406 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 OR51E1Q8TCB6 317 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 NIPAL2Q9H841 368 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 MTFP1Q9UDX5 166 aa12.07□□□□□ -0.48
NEK3-205ENST00000610828 ARPC1BO15143 372 aaKnown RBP12.06□□□□□ -0.48
NEK3-205ENST00000610828 SSNA1O43805 119 aa12.06□□□□□ -0.48
NEK3-205ENST00000610828 FCER2P06734 321 aa12.06□□□□□ -0.48
NEK3-205ENST00000610828 ZNF17P17021 662 aa12.06□□□□□ -0.48
NEK3-205ENST00000610828 GUCA1AP43080 201 aaPredicted RBP12.06□□□□□ -0.48
NEK3-205ENST00000610828 RAC1P63000 192 aa12.06□□□□□ -0.48
NEK3-205ENST00000610828 CHAF1BQ13112 559 aa12.06□□□□□ -0.48
NEK3-205ENST00000610828 SGCAQ16586 387 aa12.06□□□□□ -0.48
NEK3-205ENST00000610828 LINC00303Q3SY05 128 aa12.06□□□□□ -0.48
NEK3-205ENST00000610828 ADGRE4PQ86SQ3 457 aa12.06□□□□□ -0.48
NEK3-205ENST00000610828 YRDCQ86U90 279 aaKnown RBP12.06□□□□□ -0.48
NEK3-205ENST00000610828 LIX1LQ8IVB5 337 aa12.06□□□□□ -0.48
NEK3-205ENST00000610828 NKAIN3Q8N8D7 197 aa12.06□□□□□ -0.48
NEK3-205ENST00000610828 ADAT3Q96EY9 351 aaPredicted RBP12.06□□□□□ -0.48
NEK3-205ENST00000610828 MS4A3Q96HJ5 214 aa12.06□□□□□ -0.48
NEK3-205ENST00000610828 NAA11Q9BSU3 229 aaPredicted RBP12.06□□□□□ -0.48
NEK3-205ENST00000610828 NOX3Q9HBY0 568 aa12.06□□□□□ -0.48
NEK3-205ENST00000610828 A0A0J9YW62 118 aa12.06□□□□□ -0.48
NEK3-205ENST00000610828 A0A1B0GVI7 797 aa12.06□□□□□ -0.48
NEK3-205ENST00000610828 FABP7O15540 132 aa12.06□□□□□ -0.48
NEK3-205ENST00000610828 VAMP5O95183 116 aa12.06□□□□□ -0.48
NEK3-205ENST00000610828 HPP00738 406 aa12.06□□□□□ -0.48
NEK3-205ENST00000610828 NR2C1P13056 603 aa12.06□□□□□ -0.48
NEK3-205ENST00000610828 CXCL3P19876 107 aa12.06□□□□□ -0.48
NEK3-205ENST00000610828 ENPP1P22413 925 aa12.06□□□□□ -0.48
NEK3-205ENST00000610828 PRSS3P35030 304 aa12.06□□□□□ -0.48
NEK3-205ENST00000610828 Q5BKY6 102 aa12.06□□□□□ -0.48
NEK3-205ENST00000610828 ACER2Q5QJU3 275 aa12.06□□□□□ -0.48
NEK3-205ENST00000610828 OR10K2Q6IF99 312 aa12.06□□□□□ -0.48
NEK3-205ENST00000610828 ZNF627Q7L945 461 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms