RNA–Protein interactions for RNA: ENST00000599716.5

SHKBP1-220, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-220ENST00000599716 ASH2LQ9UBL3 628 aa7.2□□□□□ -1.26
SHKBP1-220ENST00000599716 CGGBP1Q9UFW8 167 aaPredicted RBP7.2□□□□□ -1.26
SHKBP1-220ENST00000599716 IL19Q9UHD0 177 aa7.2□□□□□ -1.26
SHKBP1-220ENST00000599716 IL20RAQ9UHF4 553 aa7.2□□□□□ -1.26
SHKBP1-220ENST00000599716 A4GNTQ9UNA3 340 aa7.2□□□□□ -1.26
SHKBP1-220ENST00000599716 LRCH1Q9Y2L9 728 aa7.2□□□□□ -1.26
SHKBP1-220ENST00000599716 EFCAB9A8MZ26 197 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 H3BSA7 217 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 FXYD1O00168 92 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 CDC42EP2O14613 210 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 FFAR1O14842 300 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 PIN1P1O15428 100 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 PRB2P02812 416 aaPredicted RBP7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 MELTFP08582 738 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 RPL4P36578 427 aaKnown RBP7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 PITPNBP48739 271 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 PCBD1P61457 104 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 GUCY1A3Q02108 690 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 POU4F2Q12837 409 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 MPPED2Q15777 294 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 CYBRD1Q53TN4 286 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 TTMPQ5BVD1 217 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 VAX1Q5SQQ9 334 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 INTS11Q5TA45 600 aaKnown RBP7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 WDR25Q64LD2 544 aaPredicted RBP7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 OLFML2AQ68BL7 652 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 SFRP4Q6FHJ7 346 aaPredicted RBP7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 C9orf139Q6ZV77 190 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 CROCCP2Q86T23 111 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 CALHM3Q86XJ0 350 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 FGFRL1Q8N441 504 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 NPEPL1Q8NDH3 523 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 LIPHQ8WWY8 451 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 NEIL1Q96FI4 390 aaPredicted RBP7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 TSSK2Q96PF2 358 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 SEMA6AQ9H2E6 1030 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 ZMAT3Q9HA38 289 aaKnown RBP7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 UFSP2Q9NUQ7 469 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 TBCCD1Q9NVR7 557 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 CTSZQ9UBR2 303 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 NDRG4Q9ULP0 352 aaKnown RBP7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 TMCC3Q9ULS5 477 aa7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 COA3Q9Y2R0 106 aaPredicted RBP7.19□□□□□ -1.26
SHKBP1-220ENST00000599716 A0A0G2JND7 137 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 TEX13CA0A0J9YWL9 993 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 KIR2DS1A0A191URI9 304 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 NPIPB13A6NJU9 1138 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 SRRM5B3KS81 715 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 NPIPB4C9JG80 1138 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 SLC16A7O60669 478 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 FCN3O75636 299 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 IGHV4-59P01825 116 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 GUCA1AP43080 201 aaPredicted RBP7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 DLX1P56177 255 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 ELF3P78545 371 aaPredicted RBP7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 SCRN3Q0VDG4 424 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 ZNF404Q494X3 552 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 BEND6Q5SZJ8 279 aaPredicted RBP7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 ASPHD2Q6ICH7 369 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 ARL9Q6T311 187 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 LRRN1Q6UXK5 716 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 Q6YL49 198 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 ZNF841Q6ZN19 808 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 ZER1Q7Z7L7 766 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 OAFQ86UD1 273 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 NAA40Q86UY6 237 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 MUC20Q8N307 709 aaPredicted RBP7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 OR8G5Q8NG78 346 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 OR8B3Q8NGG8 313 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 OR1F12Q8NHA8 337 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 FAM110DQ8TAY7 271 aaPredicted RBP7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 C10orf82Q8WW14 230 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 DYDC1Q8WWB3 177 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 PTP4A1Q93096 173 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 ZNF583Q96ND8 569 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 TECTBQ96PL2 329 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 OR8B2Q96RD0 313 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 TBX15Q96SF7 602 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 CITED1Q99966 193 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 RBM4BQ9BQ04 359 aaKnown RBP7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 ECSITQ9BQ95 431 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 SYT4Q9H2B2 425 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 MMADHCQ9H3L0 296 aaPredicted RBP7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 BEX1Q9HBH7 125 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 SMURF1Q9HCE7 757 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 STX18Q9P2W9 335 aaKnown RBP7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 DNAJB11Q9UBS4 358 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 CLN8Q9UBY8 286 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 BAG5Q9UL15 447 aa7.18□□□□□ -1.26
SHKBP1-220ENST00000599716 A0A087WUU8 490 aa7.17□□□□□ -1.26
SHKBP1-220ENST00000599716 CENPVL3A0A0U1RRI6 287 aa7.17□□□□□ -1.26
SHKBP1-220ENST00000599716 A0A1B0GW55 424 aa7.17□□□□□ -1.26
SHKBP1-220ENST00000599716 CLPSL1A2RUU4 121 aa7.17□□□□□ -1.26
SHKBP1-220ENST00000599716 PRSS37A4D1T9 235 aa7.17□□□□□ -1.26
SHKBP1-220ENST00000599716 C5orf63A6NC05 138 aa7.17□□□□□ -1.26
SHKBP1-220ENST00000599716 OR6C6A6NF89 314 aa7.17□□□□□ -1.26
SHKBP1-220ENST00000599716 A6NIZ1 184 aa7.17□□□□□ -1.26
SHKBP1-220ENST00000599716 DCTN6O00399 190 aa7.17□□□□□ -1.26
SHKBP1-220ENST00000599716 SOCS2O14508 198 aa7.17□□□□□ -1.26
SHKBP1-220ENST00000599716 SURF4O15260 269 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms