RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 SLC22A4Q9H015 551 aa7.21□□□□□ -1.26
SMAD4-215ENST00000592911 PAIP1Q9H074 479 aaKnown RBP7.21□□□□□ -1.26
SMAD4-215ENST00000592911 RANBP3Q9H6Z4 567 aaPredicted RBP7.21□□□□□ -1.26
SMAD4-215ENST00000592911 RAB18Q9NP72 206 aa7.21□□□□□ -1.26
SMAD4-215ENST00000592911 THAP1Q9NVV9 213 aa7.21□□□□□ -1.26
SMAD4-215ENST00000592911 ERVK-18Q9QC07 812 aa7.21□□□□□ -1.26
SMAD4-215ENST00000592911 KPTNQ9Y664 436 aa7.21□□□□□ -1.26
SMAD4-215ENST00000592911 RYR3Q15413 4870 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 A0A1B0GVI7 797 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 A6NIZ1 184 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 IQCF6A8MYZ5 107 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 EVPLLA8MZ36 301 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 FAM229AH3BQW9 127 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 TPST1O60507 370 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 THRBP10828 461 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 UMPSP11172 480 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 NME5P56597 212 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 PCBP3P57721 371 aaKnown RBP7.2□□□□□ -1.26
SMAD4-215ENST00000592911 RAP1BP61224 184 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 RAP1AP62834 184 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 ERVK-25P63136 954 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 IFFO1Q0D2I5 559 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 STX3Q13277 289 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 DCTN2Q13561 401 aaKnown RBP7.2□□□□□ -1.26
SMAD4-215ENST00000592911 SCARB2Q14108 478 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 SPRNQ5BIV9 151 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 ENTPD8Q5MY95 495 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 SLC2A7Q6PXP3 512 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 COMTD1Q86VU5 262 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 FAM156AQ8NDB6 213 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 OR11L1Q8NGX0 322 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 AKR7LQ8NHP1 331 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 NFKBIDQ8NI38 313 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 LRRC8CQ8TDW0 803 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 TAF15Q92804 592 aaKnown RBP eCLIP7.2□□□□□ -1.26
SMAD4-215ENST00000592911 CMBLQ96DG6 245 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 ZNF582Q96NG8 517 aaPredicted RBP7.2□□□□□ -1.26
SMAD4-215ENST00000592911 TBX15Q96SF7 602 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 PCGF1Q9BSM1 259 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 ZNRD1Q9P1U0 126 aa7.2□□□□□ -1.26
SMAD4-215ENST00000592911 C22orf46C9J442 243 aa7.19□□□□□ -1.26
SMAD4-215ENST00000592911 H0YL77 283 aa7.19□□□□□ -1.26
SMAD4-215ENST00000592911 BLOC1S5-TXNDC5H3BN57 136 aa7.19□□□□□ -1.26
SMAD4-215ENST00000592911 OR7A10O76100 309 aa7.19□□□□□ -1.26
SMAD4-215ENST00000592911 LYPD3O95274 346 aa7.19□□□□□ -1.26
SMAD4-215ENST00000592911 SLC2A10O95528 541 aa7.19□□□□□ -1.26
SMAD4-215ENST00000592911 PTBP3O95758 552 aaKnown RBP7.19□□□□□ -1.26
SMAD4-215ENST00000592911 IGHV4-59P01825 116 aa7.19□□□□□ -1.26
SMAD4-215ENST00000592911 LAP3P28838 519 aa7.19□□□□□ -1.26
SMAD4-215ENST00000592911 CD200P41217 278 aa7.19□□□□□ -1.26
SMAD4-215ENST00000592911 KIR2DS4P43632 304 aa7.19□□□□□ -1.26
SMAD4-215ENST00000592911 EMX1Q04741 257 aaPredicted RBP7.19□□□□□ -1.26
SMAD4-215ENST00000592911 CD47Q08722 323 aa7.19□□□□□ -1.26
SMAD4-215ENST00000592911 AQP6Q13520 282 aa7.19□□□□□ -1.26
SMAD4-215ENST00000592911 SGCAQ16586 387 aa7.19□□□□□ -1.26
SMAD4-215ENST00000592911 AANATQ16613 207 aa7.19□□□□□ -1.26
SMAD4-215ENST00000592911 GTDC1Q4AE62 458 aa7.19□□□□□ -1.26
SMAD4-215ENST00000592911 INTS11Q5TA45 600 aaKnown RBP7.19□□□□□ -1.26
SMAD4-215ENST00000592911 PATL1Q86TB9 770 aaKnown RBP7.19□□□□□ -1.26
SMAD4-215ENST00000592911 JAZF1Q86VZ6 243 aa7.19□□□□□ -1.26
SMAD4-215ENST00000592911 ATG16L2Q8NAA4 619 aa7.19□□□□□ -1.26
SMAD4-215ENST00000592911 SCCPDHQ8NBX0 429 aa7.19□□□□□ -1.26
SMAD4-215ENST00000592911 C11orf65Q8NCR3 313 aa7.19□□□□□ -1.26
SMAD4-215ENST00000592911 HDAC2Q92769 488 aaKnown RBP7.19□□□□□ -1.26
SMAD4-215ENST00000592911 APOBEC3DQ96AK3 386 aaPredicted RBP7.19□□□□□ -1.26
SMAD4-215ENST00000592911 SIRPDQ9H106 197 aa7.19□□□□□ -1.26
SMAD4-215ENST00000592911 KAAG1Q9UBP8 84 aa7.19□□□□□ -1.26
SMAD4-215ENST00000592911 HIF3AQ9Y2N7 669 aa7.19□□□□□ -1.26
SMAD4-215ENST00000592911 FAM96BQ9Y3D0 163 aa7.19□□□□□ -1.26
SMAD4-215ENST00000592911 SOX21Q9Y651 276 aaPredicted RBP7.19□□□□□ -1.26
SMAD4-215ENST00000592911 TRBV5-3A0A0A0MS03 114 aa7.18□□□□□ -1.26
SMAD4-215ENST00000592911 TRAV38-1A0A0B4J264 116 aa7.18□□□□□ -1.26
SMAD4-215ENST00000592911 ZNF816-ZNF321PA0A0X1KG74 233 aa7.18□□□□□ -1.26
SMAD4-215ENST00000592911 OR6C6A6NF89 314 aa7.18□□□□□ -1.26
SMAD4-215ENST00000592911 FBP2O00757 339 aa7.18□□□□□ -1.26
SMAD4-215ENST00000592911 UBDO15205 165 aa7.18□□□□□ -1.26
SMAD4-215ENST00000592911 SGCEO43556 437 aa7.18□□□□□ -1.26
SMAD4-215ENST00000592911 DOK2O60496 412 aa7.18□□□□□ -1.26
SMAD4-215ENST00000592911 SFTPBP07988 381 aa7.18□□□□□ -1.26
SMAD4-215ENST00000592911 FUT1P19526 365 aa7.18□□□□□ -1.26
SMAD4-215ENST00000592911 CD247P20963 164 aa7.18□□□□□ -1.26
SMAD4-215ENST00000592911 GABRA5P31644 462 aa7.18□□□□□ -1.26
SMAD4-215ENST00000592911 CDAP32320 146 aa7.18□□□□□ -1.26
SMAD4-215ENST00000592911 HTR5AP47898 357 aa7.18□□□□□ -1.26
SMAD4-215ENST00000592911 RPL27P61353 136 aaKnown RBP7.18□□□□□ -1.26
SMAD4-215ENST00000592911 LSM6P62312 80 aaKnown RBP7.18□□□□□ -1.26
SMAD4-215ENST00000592911 EGR3Q06889 387 aa7.18□□□□□ -1.26
SMAD4-215ENST00000592911 MZT1Q08AG7 82 aa7.18□□□□□ -1.26
SMAD4-215ENST00000592911 COX10Q12887 443 aa7.18□□□□□ -1.26
SMAD4-215ENST00000592911 ENDOGQ14249 297 aaKnown RBP7.18□□□□□ -1.26
SMAD4-215ENST00000592911 CDONQ4KMG0 1287 aa7.18□□□□□ -1.26
SMAD4-215ENST00000592911 NXNQ6DKJ4 435 aa7.18□□□□□ -1.26
SMAD4-215ENST00000592911 PGM2L1Q6PCE3 622 aa7.18□□□□□ -1.26
SMAD4-215ENST00000592911 C1orf122Q6ZSJ8 110 aa7.18□□□□□ -1.26
SMAD4-215ENST00000592911 LSRQ86X29 649 aaPredicted RBP7.18□□□□□ -1.26
SMAD4-215ENST00000592911 C17orf53Q8N3J3 647 aaPredicted RBP7.18□□□□□ -1.26
SMAD4-215ENST00000592911 CLDN22Q8N7P3 220 aa7.18□□□□□ -1.26
SMAD4-215ENST00000592911 OR4F17Q8NGA8 305 aa7.18□□□□□ -1.26
SMAD4-215ENST00000592911 OR6T1Q8NGN1 323 aa7.18□□□□□ -1.26
SMAD4-215ENST00000592911 SGTBQ96EQ0 304 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms