RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 KLHDC2Q9Y2U9 406 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 CAB39Q9Y376 341 aaPredicted RBP11.29□□□□□ -0.6
SPG7-209ENST00000564047 TIMM10BQ9Y5J6 103 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 PHF3Q92576 2039 aaKnown RBP11.29□□□□□ -0.6
SPG7-209ENST00000564047 AKAP9Q99996 3911 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 ARPC4-TTLL3A0A0A6YYG9 625 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 A0A1B0GVG6 124 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 MYL12BO14950 172 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 RAD51DO75771 328 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 SULT1C4O75897 302 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 UBL3O95164 117 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 CLDN1O95832 211 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 MMP7P09237 267 aaPredicted RBP11.28□□□□□ -0.6
SPG7-209ENST00000564047 CD79BP40259 229 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 ASCL1P50553 236 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 ROM1Q03395 351 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 ZNF846Q147U1 533 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 TIGD6Q17RP2 521 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 CDONQ4KMG0 1287 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 HIKESHIQ53FT3 197 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 C1QTNF12Q5T7M4 302 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 TMPRSS11AQ6ZMR5 421 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 STAC2Q6ZMT1 411 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 PLEKHG7Q6ZR37 379 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 BHLHA15Q7RTS1 189 aaPredicted RBP11.28□□□□□ -0.6
SPG7-209ENST00000564047 SSX6Q7RTT6 188 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 ZGRF1Q86YA3 2104 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 SYS1Q8N2H4 156 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 KLHL36Q8N4N3 616 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 RFLNBQ8N5W9 214 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 LILRB4Q8NHJ6 448 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 DYNC2LI1Q8TCX1 351 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 SNX33Q8WV41 574 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 RNF133Q8WVZ7 376 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 NANOS1Q8WY41 292 aaKnown RBP11.28□□□□□ -0.6
SPG7-209ENST00000564047 MAP6Q96JE9 813 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 DACH2Q96NX9 599 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 OR8B4Q96RC9 309 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 AMELYQ99218 206 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 USB1Q9BQ65 265 aaKnown RBP11.28□□□□□ -0.6
SPG7-209ENST00000564047 MND1Q9BWT6 205 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 OCEL1Q9H607 264 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 OBP2BQ9NPH6 170 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 SLC17A5Q9NRA2 495 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 ZNF224Q9NZL3 707 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 SLC5A6Q9Y289 635 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 A3GALT2U3KPV4 340 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 NF1P21359 2839 aa11.28□□□□□ -0.6
SPG7-209ENST00000564047 POLEQ07864 2286 aa11.27□□□□□ -0.61
SPG7-209ENST00000564047 OR5H1A6NKK0 313 aa11.27□□□□□ -0.61
SPG7-209ENST00000564047 RER1O15258 196 aa11.27□□□□□ -0.61
SPG7-209ENST00000564047 ZNF254O75437 659 aa11.27□□□□□ -0.61
SPG7-209ENST00000564047 ZNF12P17014 697 aa11.27□□□□□ -0.61
SPG7-209ENST00000564047 ZNF32P17041 273 aa11.27□□□□□ -0.61
SPG7-209ENST00000564047 AGAP20933 346 aa11.27□□□□□ -0.61
SPG7-209ENST00000564047 IL32P24001 234 aa11.27□□□□□ -0.61
SPG7-209ENST00000564047 ARR3P36575 388 aa11.27□□□□□ -0.61
SPG7-209ENST00000564047 CAPZA2P47755 286 aa11.27□□□□□ -0.61
SPG7-209ENST00000564047 UBE2NP61088 152 aaKnown RBP11.27□□□□□ -0.61
SPG7-209ENST00000564047 TSC22D1Q15714 1073 aa11.27□□□□□ -0.61
SPG7-209ENST00000564047 TIMM50Q3ZCQ8 353 aa11.27□□□□□ -0.61
SPG7-209ENST00000564047 FBXL19-AS1Q494R0 122 aa11.27□□□□□ -0.61
SPG7-209ENST00000564047 ZNF684Q5T5D7 378 aa11.27□□□□□ -0.61
SPG7-209ENST00000564047 TMEM53Q6P2H8 277 aa11.27□□□□□ -0.61
SPG7-209ENST00000564047 DEGS2Q6QHC5 323 aa11.27□□□□□ -0.61
SPG7-209ENST00000564047 CFAP77Q6ZQR2 320 aa11.27□□□□□ -0.61
SPG7-209ENST00000564047 KCTD20Q7Z5Y7 419 aa11.27□□□□□ -0.61
SPG7-209ENST00000564047 STEAP2Q8NFT2 490 aa11.27□□□□□ -0.61
SPG7-209ENST00000564047 FGFBP3Q8TAT2 258 aa11.27□□□□□ -0.61
SPG7-209ENST00000564047 SLAMF6Q96DU3 332 aa11.27□□□□□ -0.61
SPG7-209ENST00000564047 OR2H1Q9GZK4 316 aa11.27□□□□□ -0.61
SPG7-209ENST00000564047 OR10A4Q9H209 315 aa11.27□□□□□ -0.61
SPG7-209ENST00000564047 RNF121Q9H920 327 aa11.27□□□□□ -0.61
SPG7-209ENST00000564047 HMG20AQ9NP66 347 aa11.27□□□□□ -0.61
SPG7-209ENST00000564047 PNRC2Q9NPJ4 139 aaKnown RBP11.27□□□□□ -0.61
SPG7-209ENST00000564047 B3GNT2Q9NY97 397 aa11.27□□□□□ -0.61
SPG7-209ENST00000564047 DIDO1Q9BTC0 2240 aaKnown RBP11.27□□□□□ -0.61
SPG7-209ENST00000564047 METTL15A6NJ78 407 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 PRR32B1ATL7 298 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 CLDN25C9JDP6 229 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 ZNF878C9JN71 531 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 SGCEO43556 437 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 AIREO43918 545 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 PTHP01270 115 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 HLA-HP01893 362 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 MT-ND5P03915 603 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 KRT8P05787 483 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 TACSTD2P09758 323 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 PATE4P0C8F1 98 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 HOXC12P31275 282 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 LIPAP38571 399 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 OPRL1P41146 370 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 BMXP51813 675 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 WNT4P56705 351 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 RAB1AP62820 205 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 PSG4Q00888 419 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 FAM27E3Q08E93 113 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 RAB35Q15286 201 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 SPHARQ15513 63 aa11.26□□□□□ -0.61
SPG7-209ENST00000564047 CCDC92Q53HC0 331 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms