RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 FSTP19883 344 aa14.48□□□□□ -0.09
COL4A1-204ENST00000543140 HSD11B1P28845 292 aa14.48□□□□□ -0.09
COL4A1-204ENST00000543140 GZMKP49863 264 aa14.48□□□□□ -0.09
COL4A1-204ENST00000543140 GPR85P60893 370 aa14.48□□□□□ -0.09
COL4A1-204ENST00000543140 PCGF3Q3KNV8 242 aa14.48□□□□□ -0.09
COL4A1-204ENST00000543140 DBX2Q6ZNG2 339 aa14.48□□□□□ -0.09
COL4A1-204ENST00000543140 CIB4A0PJX0 185 aa14.47□□□□□ -0.09
COL4A1-204ENST00000543140 TNFSF11O14788 317 aa14.47□□□□□ -0.09
COL4A1-204ENST00000543140 FABP7O15540 132 aa14.47□□□□□ -0.09
COL4A1-204ENST00000543140 SYT7O43581 403 aa14.47□□□□□ -0.09
COL4A1-204ENST00000543140 PMS2P2O95744 297 aa14.47□□□□□ -0.09
COL4A1-204ENST00000543140 HPXP02790 462 aa14.47□□□□□ -0.09
COL4A1-204ENST00000543140 ANOS1P23352 680 aa14.47□□□□□ -0.09
COL4A1-204ENST00000543140 FKBP2P26885 142 aaKnown RBP14.47□□□□□ -0.09
COL4A1-204ENST00000543140 CFPP27918 469 aa14.47□□□□□ -0.09
COL4A1-204ENST00000543140 MNDAP41218 407 aa14.47□□□□□ -0.09
COL4A1-204ENST00000543140 H3F3AP84243 136 aa14.47□□□□□ -0.09
COL4A1-204ENST00000543140 BCL2A1Q16548 175 aa14.47□□□□□ -0.09
COL4A1-204ENST00000543140 SGCAQ16586 387 aa14.47□□□□□ -0.09
COL4A1-204ENST00000543140 TMEM81Q6P7N7 255 aa14.47□□□□□ -0.09
COL4A1-204ENST00000543140 ASCC1Q8N9N2 400 aaKnown RBP14.47□□□□□ -0.09
COL4A1-204ENST00000543140 ZNF775Q96BV0 537 aaPredicted RBP14.47□□□□□ -0.09
COL4A1-204ENST00000543140 ZNF385AQ96PM9 386 aaKnown RBP14.47□□□□□ -0.09
COL4A1-204ENST00000543140 OR2M2Q96R28 347 aa14.47□□□□□ -0.09
COL4A1-204ENST00000543140 ZNF275Q9NSD4 429 aaPredicted RBP14.47□□□□□ -0.09
COL4A1-204ENST00000543140 RGS13O14921 159 aa14.47□□□□□ -0.09
COL4A1-204ENST00000543140 ARPC1BO15143 372 aaKnown RBP14.47□□□□□ -0.09
COL4A1-204ENST00000543140 RBBP9O75884 186 aa14.47□□□□□ -0.09
COL4A1-204ENST00000543140 WDPCPO95876 746 aa14.47□□□□□ -0.09
COL4A1-204ENST00000543140 JMJD7P0C870 316 aa14.47□□□□□ -0.09
COL4A1-204ENST00000543140 ENPP1P22413 925 aa14.47□□□□□ -0.09
COL4A1-204ENST00000543140 ERP29P30040 261 aaKnown RBP14.47□□□□□ -0.09
COL4A1-204ENST00000543140 SNRPD2P62316 118 aaKnown RBP14.47□□□□□ -0.09
COL4A1-204ENST00000543140 GABREP78334 506 aa14.47□□□□□ -0.09
COL4A1-204ENST00000543140 HIST3H3Q16695 136 aa14.47□□□□□ -0.09
COL4A1-204ENST00000543140 ZNF627Q7L945 461 aa14.47□□□□□ -0.09
COL4A1-204ENST00000543140 HDDC2Q7Z4H3 204 aa14.47□□□□□ -0.09
COL4A1-204ENST00000543140 COMMD2Q86X83 199 aa14.47□□□□□ -0.09
COL4A1-204ENST00000543140 ELMOD2Q8IZ81 293 aa14.47□□□□□ -0.09
COL4A1-204ENST00000543140 OR51E1Q8TCB6 317 aa14.47□□□□□ -0.09
COL4A1-204ENST00000543140 C15orf40Q8WUR7 153 aa14.47□□□□□ -0.09
COL4A1-204ENST00000543140 ADAT3Q96EY9 351 aaPredicted RBP14.47□□□□□ -0.09
COL4A1-204ENST00000543140 ZNF878C9JN71 531 aa14.46□□□□□ -0.09
COL4A1-204ENST00000543140 SSNA1O43805 119 aa14.46□□□□□ -0.09
COL4A1-204ENST00000543140 PEX14O75381 377 aa14.46□□□□□ -0.09
COL4A1-204ENST00000543140 GALK2Q01415 458 aa14.46□□□□□ -0.09
COL4A1-204ENST00000543140 LINC00303Q3SY05 128 aa14.46□□□□□ -0.09
COL4A1-204ENST00000543140 PHYHD1Q5SRE7 291 aa14.46□□□□□ -0.09
COL4A1-204ENST00000543140 YRDCQ86U90 279 aaKnown RBP14.46□□□□□ -0.09
COL4A1-204ENST00000543140 OR4D6Q8NGJ1 314 aa14.46□□□□□ -0.09
COL4A1-204ENST00000543140 OR6N1Q8NGY5 312 aa14.46□□□□□ -0.09
COL4A1-204ENST00000543140 SOX7Q9BT81 388 aa14.46□□□□□ -0.09
COL4A1-204ENST00000543140 STRADBQ9C0K7 418 aa14.46□□□□□ -0.09
COL4A1-204ENST00000543140 ZMAT3Q9HA38 289 aaKnown RBP14.46□□□□□ -0.09
COL4A1-204ENST00000543140 PCSK5Q92824 1860 aa14.46□□□□□ -0.09
COL4A1-204ENST00000543140 A0A0J9YW62 118 aa14.46□□□□□ -0.1
COL4A1-204ENST00000543140 NAP1L6A6NFF2 107 aa14.46□□□□□ -0.1
COL4A1-204ENST00000543140 TTLL8A6PVC2 850 aa14.46□□□□□ -0.1
COL4A1-204ENST00000543140 H7C417 338 aa14.46□□□□□ -0.1
COL4A1-204ENST00000543140 AKR7A2O43488 359 aa14.46□□□□□ -0.1
COL4A1-204ENST00000543140 TLX3O43711 291 aaPredicted RBP14.46□□□□□ -0.1
COL4A1-204ENST00000543140 CBR3O75828 277 aa14.46□□□□□ -0.1
COL4A1-204ENST00000543140 ZNF239Q16600 458 aaKnown RBP14.46□□□□□ -0.1
COL4A1-204ENST00000543140 ESX1Q8N693 406 aa14.46□□□□□ -0.1
COL4A1-204ENST00000543140 OR4D10Q8NGI6 311 aa14.46□□□□□ -0.1
COL4A1-204ENST00000543140 OR6M1Q8NGM8 313 aa14.46□□□□□ -0.1
COL4A1-204ENST00000543140 OR1J2Q8NGS2 313 aa14.46□□□□□ -0.1
COL4A1-204ENST00000543140 ACTR6Q9GZN1 396 aa14.46□□□□□ -0.1
COL4A1-204ENST00000543140 NIPAL2Q9H841 368 aa14.46□□□□□ -0.1
COL4A1-204ENST00000543140 NOX3Q9HBY0 568 aa14.46□□□□□ -0.1
COL4A1-204ENST00000543140 MTFP1Q9UDX5 166 aa14.46□□□□□ -0.1
COL4A1-204ENST00000543140 FARSAQ9Y285 508 aaKnown RBP14.46□□□□□ -0.1
COL4A1-204ENST00000543140 LOC102725191A0A1B0GVB3 256 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 MEGF11A6BM72 1044 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 IGHEP01854 428 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 P04436 131 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 ZNF883P0CG24 379 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 ANGPT1Q15389 498 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 GFOD2Q3B7J2 385 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 C1QTNF12Q5T7M4 302 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 CREB3L2Q70SY1 520 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 NKD1Q969G9 470 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 GLTPQ9NZD2 209 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 KIAA1549Q9HCM3 1950 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 ARPC4-TTLL3A0A0A6YYG9 625 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 NPIPA2E9PIF3 369 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 NPIPA3F8WFD2 350 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 PRSS3P35030 304 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 RAG2P55895 527 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 ZNF121P58317 390 aaPredicted RBP14.45□□□□□ -0.1
COL4A1-204ENST00000543140 CCDC92Q53HC0 331 aaPredicted RBP14.45□□□□□ -0.1
COL4A1-204ENST00000543140 CD276Q5ZPR3 534 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 OLFML2AQ68BL7 652 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 SLC25A25Q6KCM7 469 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 DNM1P46Q6ZS02 220 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 OR52N4Q8NGI2 321 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 OR8S1Q8NH09 359 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 ZFAND1Q8TCF1 268 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 SGCZQ96LD1 299 aa14.45□□□□□ -0.1
COL4A1-204ENST00000543140 ZNF416Q9BWM5 594 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms