RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 ZNF823P16415 610 aa9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 CD40P25942 277 aa9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 APEX1P27695 318 aaKnown RBP9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 OTX1P32242 354 aaPredicted RBP9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 ARR3P36575 388 aa9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 OPRL1P41146 370 aa9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 CAPZA2P47755 286 aa9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 IDH3GP51553 393 aaPredicted RBP9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 CXCR4P61073 352 aa9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 UBE2NP61088 152 aaKnown RBP9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 DAZAP2Q15038 168 aaPredicted RBP9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 NCMAPQ5T1S8 102 aa9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 LCN1P1Q5VSP4 162 aa9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 SP5Q6BEB4 398 aaPredicted RBP9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 PRSS45Q7RTY3 260 aa9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 ZNF295-AS1Q8N0V1 137 aa9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 OR6N2Q8NGY6 317 aa9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 LILRB1Q8NHL6 650 aaPredicted RBP9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 ZNF420Q8TAQ5 688 aaPredicted RBP9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 FAM222BQ8WU58 562 aa9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 RFKQ969G6 155 aa9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 MUCL1Q96DR8 90 aa9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 LRRC46Q96FV0 321 aa9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 Q96MT0 163 aa9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 DOK1Q99704 481 aa9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 JAM3Q9BX67 310 aa9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 YTHDF1Q9BYJ9 559 aaKnown RBP9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 DUSP21Q9H596 190 aa9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 H2AFY2Q9P0M6 372 aaPredicted RBP9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 NDRG3Q9UGV2 375 aa9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 RPL36Q9Y3U8 105 aaKnown RBP9.25□□□□□ -0.93
NPIPB3-210ENST00000542817 IGHV2OR16-5A0A0B4J2B6 119 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 H3BSA7 217 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 SLC1A7O00341 560 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 SGCEO43556 437 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 SRSF10O75494 262 aaKnown RBP9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 PLAUP00749 431 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 LIMS3P0CW19 117 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 LIMS4P0CW20 117 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 COX5BP10606 129 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 PIPP12273 146 aaPredicted RBP9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 CRHBPP24387 322 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 WNT5AP41221 380 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 GUCA1AP43080 201 aaPredicted RBP9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 PCBD1P61457 104 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 SLC35A2P78381 396 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 NAAAQ02083 359 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 ROM1Q03395 351 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 BSPH1Q075Z2 132 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 SCRN3Q0VDG4 424 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 RAB40BQ12829 278 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 RAB35Q15286 201 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 MSMPQ1L6U9 139 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 ZNF829Q3KNS6 432 aaPredicted RBP9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 KCTD21Q4G0X4 260 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 ELFN2Q5R3F8 820 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 ALKBH2Q6NS38 261 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 NAA40Q86UY6 237 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 SLC35F2Q8IXU6 374 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 ZNF454Q8N9F8 522 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 ZNF485Q8NCK3 441 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 GJC3Q8NFK1 279 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 TSPAN14Q8NG11 270 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 OR10H5Q8NGA6 315 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 OR1F12Q8NHA8 337 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 BORCS5Q969J3 196 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 SLAMF6Q96DU3 332 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 COX4I2Q96KJ9 171 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 SLCO1C1Q9NYB5 712 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 MRM2Q9UI43 246 aaKnown RBP9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 PDZD2O15018 2839 aa9.24□□□□□ -0.93
NPIPB3-210ENST00000542817 A0A087WXM4 84 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 SHISA9B4DS77 424 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 M0R1B8 84 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 DOK2O60496 412 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 ICMTO60725 284 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 OR2T7P0C7T2 308 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 STOMP27105 288 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 C21orf33P30042 268 aaPredicted RBP9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 NKX6-1P78426 367 aaPredicted RBP9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 POU4F2Q12837 409 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 EIF2B1Q14232 305 aaKnown RBP9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 TMEM255AQ5JRV8 349 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 TMEM53Q6P2H8 277 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 LRRN1Q6UXK5 716 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 COLCA1Q6ZS62 124 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 LINC00299Q6ZSB3 139 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 SPATC1Q76KD6 591 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 RHOUQ7L0Q8 258 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 SSX8Q7RTT4 187 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 ZNF101Q8IZC7 436 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 SLC30A7Q8NEW0 376 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 BPIFB6Q8NFQ5 453 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 OR2T27Q8NH04 317 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 NANOS1Q8WY41 292 aaKnown RBP9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 NEUROG1Q92886 237 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 PLPPR2Q96GM1 343 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 OR8B4Q96RC9 309 aa9.23□□□□□ -0.93
NPIPB3-210ENST00000542817 TBX5Q99593 518 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms