RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 ABHD16AO95870 558 aa13.19□□□□□ -0.3
SREK1-209ENST00000520953 IL2RAP01589 272 aa13.19□□□□□ -0.3
SREK1-209ENST00000520953 IGHV1-2P23083 117 aa13.19□□□□□ -0.3
SREK1-209ENST00000520953 CEACAM8P31997 349 aaPredicted RBP13.19□□□□□ -0.3
SREK1-209ENST00000520953 ZNF181Q2M3W8 571 aa13.19□□□□□ -0.3
SREK1-209ENST00000520953 HIKESHIQ53FT3 197 aa13.19□□□□□ -0.3
SREK1-209ENST00000520953 TEX30Q5JUR7 227 aa13.19□□□□□ -0.3
SREK1-209ENST00000520953 SPANXN2Q5MJ10 180 aa13.19□□□□□ -0.3
SREK1-209ENST00000520953 SLC22A24Q8N4F4 322 aa13.19□□□□□ -0.3
SREK1-209ENST00000520953 MINDY2Q8NBR6 621 aa13.19□□□□□ -0.3
SREK1-209ENST00000520953 ST6GALNAC3Q8NDV1 305 aa13.19□□□□□ -0.3
SREK1-209ENST00000520953 OR6K3Q8NGY3 331 aa13.19□□□□□ -0.3
SREK1-209ENST00000520953 KCTD7Q96MP8 289 aa13.19□□□□□ -0.3
SREK1-209ENST00000520953 OSGIN2Q9Y236 505 aa13.19□□□□□ -0.3
SREK1-209ENST00000520953 RPL36A-HNRNPH2H7BZ11 118 aa13.18□□□□□ -0.3
SREK1-209ENST00000520953 LYZL6O75951 148 aa13.18□□□□□ -0.3
SREK1-209ENST00000520953 CELP19835 753 aa13.18□□□□□ -0.3
SREK1-209ENST00000520953 FGF9P31371 208 aaPredicted RBP13.18□□□□□ -0.3
SREK1-209ENST00000520953 TNFSF8P32971 234 aa13.18□□□□□ -0.3
SREK1-209ENST00000520953 SDC2P34741 201 aa13.18□□□□□ -0.3
SREK1-209ENST00000520953 TIMP3P35625 211 aa13.18□□□□□ -0.3
SREK1-209ENST00000520953 OR7E24Q6IFN5 339 aa13.18□□□□□ -0.3
SREK1-209ENST00000520953 OR52N5Q8NH56 324 aa13.18□□□□□ -0.3
SREK1-209ENST00000520953 NOX3Q9HBY0 568 aa13.18□□□□□ -0.3
SREK1-209ENST00000520953 PNRC2Q9NPJ4 139 aaKnown RBP13.18□□□□□ -0.3
SREK1-209ENST00000520953 CENPMQ9NSP4 180 aa13.18□□□□□ -0.3
SREK1-209ENST00000520953 IQCMA0A1B0GVH7 501 aa13.18□□□□□ -0.3
SREK1-209ENST00000520953 ISPDA4D126 451 aa13.18□□□□□ -0.3
SREK1-209ENST00000520953 RBPJQ06330 500 aa13.18□□□□□ -0.3
SREK1-209ENST00000520953 HNRNPA0Q13151 305 aaKnown RBP13.18□□□□□ -0.3
SREK1-209ENST00000520953 SF3B4Q15427 424 aaKnown RBP eCLIP13.18□□□□□ -0.38e-9■■■■□ 24.2
SREK1-209ENST00000520953 FAM27BQ5VT28 67 aa13.18□□□□□ -0.3
SREK1-209ENST00000520953 VASH1Q7L8A9 365 aaPredicted RBP13.18□□□□□ -0.3
SREK1-209ENST00000520953 LIX1LQ8IVB5 337 aa13.18□□□□□ -0.3
SREK1-209ENST00000520953 SLC7A6Q92536 515 aa13.18□□□□□ -0.3
SREK1-209ENST00000520953 PPP1R14AQ96A00 147 aa13.18□□□□□ -0.3
SREK1-209ENST00000520953 SLAMF6Q96DU3 332 aa13.18□□□□□ -0.3
SREK1-209ENST00000520953 WBP1Q96G27 269 aa13.18□□□□□ -0.3
SREK1-209ENST00000520953 CEP19Q96LK0 163 aa13.18□□□□□ -0.3
SREK1-209ENST00000520953 OR8B4Q96RC9 309 aa13.18□□□□□ -0.3
SREK1-209ENST00000520953 SDHCQ99643 169 aaPredicted RBP13.18□□□□□ -0.3
SREK1-209ENST00000520953 SLC30A2Q9BRI3 323 aa13.18□□□□□ -0.3
SREK1-209ENST00000520953 TMED9Q9BVK6 235 aa13.18□□□□□ -0.3
SREK1-209ENST00000520953 ELOVL3Q9HB03 270 aa13.18□□□□□ -0.3
SREK1-209ENST00000520953 PLEKHB1Q9UF11 243 aaPredicted RBP13.18□□□□□ -0.3
SREK1-209ENST00000520953 KMT2BQ9UMN6 2715 aaPredicted RBP13.18□□□□□ -0.3
SREK1-209ENST00000520953 TRDV1A0A1B0GX56 115 aa13.17□□□□□ -0.3
SREK1-209ENST00000520953 A0A1W2PR80 420 aa13.17□□□□□ -0.3
SREK1-209ENST00000520953 DOK2O60496 412 aa13.17□□□□□ -0.3
SREK1-209ENST00000520953 HNRNPCP07910 306 aaKnown RBP eCLIP13.17□□□□□ -0.31e-5■□□□□ 9.8
SREK1-209ENST00000520953 BMP5P22003 454 aa13.17□□□□□ -0.3
SREK1-209ENST00000520953 NANOS3P60323 173 aaKnown RBP13.17□□□□□ -0.3
SREK1-209ENST00000520953 LIPNQ5VXI9 398 aa13.17□□□□□ -0.3
SREK1-209ENST00000520953 TMPRSS11AQ6ZMR5 421 aa13.17□□□□□ -0.3
SREK1-209ENST00000520953 LUZP2Q86TE4 346 aa13.17□□□□□ -0.3
SREK1-209ENST00000520953 LAX1Q8IWV1 398 aa13.17□□□□□ -0.3
SREK1-209ENST00000520953 YIPF7Q8N8F6 280 aa13.17□□□□□ -0.3
SREK1-209ENST00000520953 MED18Q9BUE0 208 aa13.17□□□□□ -0.3
SREK1-209ENST00000520953 PLSCR4Q9NRQ2 329 aa13.17□□□□□ -0.3
SREK1-209ENST00000520953 BABAM2Q9NXR7 383 aa13.17□□□□□ -0.3
SREK1-209ENST00000520953 PROCRQ9UNN8 238 aa13.17□□□□□ -0.3
SREK1-209ENST00000520953 LRP12Q9Y561 859 aa13.17□□□□□ -0.3
SREK1-209ENST00000520953 CHD6Q8TD26 2715 aa13.17□□□□□ -0.3
SREK1-209ENST00000520953 SMIM30A4D0T7 59 aa13.17□□□□□ -0.3
SREK1-209ENST00000520953 RGS5O15539 181 aa13.17□□□□□ -0.3
SREK1-209ENST00000520953 HLA-HP01893 362 aa13.17□□□□□ -0.3
SREK1-209ENST00000520953 MT-ND5P03915 603 aa13.17□□□□□ -0.3
SREK1-209ENST00000520953 ZNF32P17041 273 aa13.17□□□□□ -0.3
SREK1-209ENST00000520953 GUCA1AP43080 201 aaPredicted RBP13.17□□□□□ -0.3
SREK1-209ENST00000520953 LSM6P62312 80 aaKnown RBP13.17□□□□□ -0.3
SREK1-209ENST00000520953 INSL4Q14641 139 aa13.17□□□□□ -0.3
SREK1-209ENST00000520953 IGFBP7Q16270 282 aa13.17□□□□□ -0.3
SREK1-209ENST00000520953 CCDC92Q53HC0 331 aaPredicted RBP13.17□□□□□ -0.3
SREK1-209ENST00000520953 ZNF474Q6S9Z5 364 aaPredicted RBP13.17□□□□□ -0.3
SREK1-209ENST00000520953 AKR7LQ8NHP1 331 aa13.17□□□□□ -0.3
SREK1-209ENST00000520953 HDHD5Q9BXW7 423 aa13.17□□□□□ -0.3
SREK1-209ENST00000520953 SLC5A6Q9Y289 635 aa13.17□□□□□ -0.3
SREK1-209ENST00000520953 OR6C65A6NJZ3 312 aa13.16□□□□□ -0.3
SREK1-209ENST00000520953 DVL2O14641 736 aa13.16□□□□□ -0.3
SREK1-209ENST00000520953 RAD51DO75771 328 aa13.16□□□□□ -0.3
SREK1-209ENST00000520953 PNPP00491 289 aa13.16□□□□□ -0.3
SREK1-209ENST00000520953 MPGP29372 298 aa13.16□□□□□ -0.3
SREK1-209ENST00000520953 MFGE8Q08431 387 aaPredicted RBP13.16□□□□□ -0.3
SREK1-209ENST00000520953 Q6ZT83 130 aa13.16□□□□□ -0.3
SREK1-209ENST00000520953 GABRG1Q8N1C3 465 aa13.16□□□□□ -0.3
SREK1-209ENST00000520953 ZNF454Q8N9F8 522 aa13.16□□□□□ -0.3
SREK1-209ENST00000520953 OR1K1Q8NGR3 316 aa13.16□□□□□ -0.3
SREK1-209ENST00000520953 OR2AJ1Q8NGZ0 328 aa13.16□□□□□ -0.3
SREK1-209ENST00000520953 RNF133Q8WVZ7 376 aa13.16□□□□□ -0.3
SREK1-209ENST00000520953 DMRTA2Q96SC8 542 aa13.16□□□□□ -0.3
SREK1-209ENST00000520953 C1orf198Q9H425 327 aa13.16□□□□□ -0.3
SREK1-209ENST00000520953 ST6GALNAC2Q9UJ37 374 aa13.16□□□□□ -0.3
SREK1-209ENST00000520953 GSTK1Q9Y2Q3 226 aa13.16□□□□□ -0.3
SREK1-209ENST00000520953 TMEM14AQ9Y6G1 99 aa13.16□□□□□ -0.3
SREK1-209ENST00000520953 V9GYH0 126 aa13.16□□□□□ -0.3
SREK1-209ENST00000520953 LOC110117498-PIK3R3F6TDL0 507 aa13.15□□□□□ -0.3
SREK1-209ENST00000520953 H3BSH0 61 aa13.15□□□□□ -0.3
SREK1-209ENST00000520953 GABRPO00591 440 aa13.15□□□□□ -0.3
SREK1-209ENST00000520953 ATXN7O15265 892 aaPredicted RBP13.15□□□□□ -0.3
SREK1-209ENST00000520953 HOXD4P09016 255 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 410.9 ms