RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 NANOS2P60321 138 aaKnown RBP3.84□□□□□ -1.79
SDCBP-205ENST00000447267 GNGT1P63211 74 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 MRPS25P82663 173 aaKnown RBP3.84□□□□□ -1.79
SDCBP-205ENST00000447267 CHIT1Q13231 466 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 DDX39BQ13838 428 aaKnown RBP3.84□□□□□ -1.79
SDCBP-205ENST00000447267 CASP8Q14790 479 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 CNPY1Q3B7I2 92 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 PAGE2BQ5JRK9 111 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 GRTP1Q5TC63 336 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 RNF220Q5VTB9 566 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 AADACL4Q5VUY2 407 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 C4orf22Q6V702 233 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 C5orf24Q7Z6I8 188 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 PAQR4Q8N4S7 273 aaPredicted RBP3.84□□□□□ -1.79
SDCBP-205ENST00000447267 ZNF283Q8N7M2 679 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 POMGNT2Q8NAT1 580 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 OR9A2Q8NGT5 310 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 ANGPTL6Q8NI99 470 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 PIGXQ8TBF5 258 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 GPR119Q8TDV5 335 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 C10orf82Q8WW14 230 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 ZNF75AQ96N20 296 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 SERPINB12Q96P63 405 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 ZNF317Q96PQ6 595 aaPredicted RBP3.84□□□□□ -1.79
SDCBP-205ENST00000447267 FYTTD1Q96QD9 318 aaKnown RBP3.84□□□□□ -1.79
SDCBP-205ENST00000447267 COQ7Q99807 217 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 OSBPL8Q9BZF1 889 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 NCOR1P1Q9H4R4 102 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 IKZF5Q9H5V7 419 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 RNF121Q9H920 327 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 MOV10Q9HCE1 1003 aaKnown RBP3.84□□□□□ -1.79
SDCBP-205ENST00000447267 ARMC1Q9NVT9 282 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 B3GNT2Q9NY97 397 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 TAS2R13Q9NYV9 303 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 SLC7A8Q9UHI5 535 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 FBXO5Q9UKT4 447 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 RAB21Q9UL25 225 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 OARD1Q9Y530 152 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 LRP2P98164 4655 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 ZCWPW2A0A1B0GU75 182 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 SLC22A23A1A5C7 686 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 E7EVH7 732 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 TMEM178BH3BS89 294 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 CCL24O00175 119 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 MANBAO00462 879 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 SLC22A3O75751 556 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 KLHL2O95198 593 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 PSMG1O95456 288 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 TOMM40O96008 361 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 CYB5R3P00387 301 aaPredicted RBP3.83□□□□□ -1.8
SDCBP-205ENST00000447267 OTCP00480 354 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 KRT6AP02538 564 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 KRT6BP04259 564 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 FGF2P09038 288 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 TFPTP0C1Z6 253 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 TFPIP10646 304 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 ACP2P11117 423 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 SELLP14151 372 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 ETS1P14921 441 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 ETS2P15036 469 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 TNFRSF1BP20333 461 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 EEF1B2P24534 225 aaKnown RBP3.83□□□□□ -1.8
SDCBP-205ENST00000447267 TYK2P29597 1187 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 MPV17P39210 176 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 HSPA13P48723 471 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 HSPA7P48741 367 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 SLC12A2P55011 1212 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 HADHBP55084 474 aaKnown RBP3.83□□□□□ -1.8
SDCBP-205ENST00000447267 OR2B6P58173 313 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 RPL23AP62750 156 aaKnown RBP3.83□□□□□ -1.8
SDCBP-205ENST00000447267 CSNK2BP67870 215 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 CSNK2A1P68400 391 aaPredicted RBP3.83□□□□□ -1.8
SDCBP-205ENST00000447267 S100A12P80511 92 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 TNFAIP6P98066 277 aaPredicted RBP3.83□□□□□ -1.8
SDCBP-205ENST00000447267 IRF8Q02556 426 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 ZNF117Q03924 483 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 ZNF91Q05481 1191 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 CYLC2Q14093 348 aaPredicted RBP3.83□□□□□ -1.8
SDCBP-205ENST00000447267 CNN3Q15417 329 aaKnown RBP3.83□□□□□ -1.8
SDCBP-205ENST00000447267 PDK4Q16654 411 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 HIST2H2ACQ16777 129 aaPredicted RBP3.83□□□□□ -1.8
SDCBP-205ENST00000447267 LRRC75BQ2VPJ9 315 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 DEFB136Q30KP8 78 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 NDUFAF6Q330K2 333 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 GLE1Q53GS7 698 aaKnown RBP3.83□□□□□ -1.8
SDCBP-205ENST00000447267 SLC25A53Q5H9E4 307 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 FAM27D1Q5T7N8 215 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 HIST2H2AA3Q6FI13 130 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 C3orf33Q6P1S2 294 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 MED27Q6P2C8 311 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 CBLN3Q6UW01 205 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 DCDC5Q6ZRR9 648 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 PATL1Q86TB9 770 aaKnown RBP3.83□□□□□ -1.8
SDCBP-205ENST00000447267 LRRC8AQ8IWT6 810 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 LRRC34Q8IZ02 419 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 C19orf18Q8NEA5 215 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 OR4X2Q8NGF9 303 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 OR51G2Q8NGK0 314 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 OR5M8Q8NGP6 311 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 OR10Z1Q8NGY1 313 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms