RNA–Protein interactions for RNA: ENST00000428585.5

CARF-208, Transcript of calcium responsive transcription factor, human

TSL 2 BASIC

Gene CARF, Length 2,513 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CARF-208	ENST00000428585	ATP5J2	P56134	94 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	PLP1	P60201	277 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	PRPS1	P60891	318 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	DEFB109B	Q30KR1	87 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	LYPLAL1	Q5VWZ2	237 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	FRG2	Q64ET8	278 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	FAM71F2	Q6NXP2	309 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	PLET1	Q6UQ28	207 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	ASCL4	Q6XD76	172 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	FAM92B	Q6ZTR7	304 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	4.06	□□□□□ -1.76
CARF-208	ENST00000428585	DPPA2	Q7Z7J5	298 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	TMEM132C	Q8N3T6	1108 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	WDSUB1	Q8N9V3	476 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	ZNF548	Q8NEK5	533 aa	Predicted RBP	4.06	□□□□□ -1.76
CARF-208	ENST00000428585	OR5B17	Q8NGF7	314 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	OR2T4	Q8NH00	348 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	NR4A3	Q92570	626 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	ROPN1L	Q96C74	230 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	C10orf35	Q96D05	121 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	MBOAT4	Q96T53	435 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	SPATA25	Q9BR10	227 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	MARVELD1	Q9BSK0	173 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	MED10	Q9BTT4	135 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	ALG8	Q9BVK2	526 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	DPEP2	Q9H4A9	486 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	DDX31	Q9H8H2	851 aa	Known RBP	4.06	□□□□□ -1.76
CARF-208	ENST00000428585	PLAC1	Q9HBJ0	212 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	SPHK2	Q9NRA0	654 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	C19orf12	Q9NSK7	152 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	FOXJ2	Q9P0K8	574 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	SEC14L4	Q9UDX3	406 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	SSR3	Q9UNL2	185 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	RNF6	Q9Y252	685 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	COQ4	Q9Y3A0	265 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	TPRKB	Q9Y3C4	175 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	RAP2C	Q9Y3L5	183 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	KCTD3	Q9Y597	815 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	TNFRSF18	Q9Y5U5	241 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	KNL1	Q8NG31	2342 aa		4.06	□□□□□ -1.76
CARF-208	ENST00000428585	TRBV5-7	A0A0A0MS05	114 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585		A0A1W2PPE3	182 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	HYKK	A2RU49	373 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	LRRC3C	A6NJW4	275 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	KCNK1	O00180	336 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	KPNA3	O00505	521 aa	Predicted RBP	4.05	□□□□□ -1.76
CARF-208	ENST00000428585	TCAP	O15273	167 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	TOX3	O15405	576 aa	Predicted RBP	4.05	□□□□□ -1.76
CARF-208	ENST00000428585	RAD1	O60671	282 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	ZG16	O60844	167 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	GPX5	O75715	221 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	NEURL1	O76050	574 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	GADD45G	O95257	159 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	PAK4	O96013	591 aa	Predicted RBP	4.05	□□□□□ -1.76
CARF-208	ENST00000428585	CRYAB	P02511	175 aa	Known RBP	4.05	□□□□□ -1.76
CARF-208	ENST00000428585	RPLP0	P05388	317 aa	Known RBP	4.05	□□□□□ -1.76
CARF-208	ENST00000428585	CBSL	P0DN79	551 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	TSPAN8	P19075	237 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	RAB3B	P20337	219 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	MMP11	P24347	488 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	ITGB7	P26010	798 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	PDHA2	P29803	388 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	APOBEC3A	P31941	199 aa	Predicted RBP	4.05	□□□□□ -1.76
CARF-208	ENST00000428585	RPL22	P35268	128 aa	Known RBP	4.05	□□□□□ -1.76
CARF-208	ENST00000428585	CBS	P35520	551 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	RBMX	P38159	391 aa	Known RBP	4.05	□□□□□ -1.76
CARF-208	ENST00000428585	CRYBB2	P43320	205 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	RPL14	P50914	215 aa	Known RBP	4.05	□□□□□ -1.76
CARF-208	ENST00000428585	CLDN20	P56880	219 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	ECH1	Q13011	328 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	IRF4	Q15306	451 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	SPHAR	Q15513	63 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	ELAVL1	Q15717	326 aa	Known RBP	4.05	□□□□□ -1.76
CARF-208	ENST00000428585	LGALSL	Q3ZCW2	172 aa	Predicted RBP	4.05	□□□□□ -1.76
CARF-208	ENST00000428585	SAXO2	Q658L1	398 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	OR5M10	Q6IEU7	315 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	RBMS3	Q6XE24	437 aa	Known RBP	4.05	□□□□□ -1.76
CARF-208	ENST00000428585		Q6ZNB5	142 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	CYS1	Q717R9	158 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	PGAP1	Q75T13	922 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	FAM71A	Q8IYT1	594 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	TTC29	Q8NA56	475 aa	Predicted RBP	4.05	□□□□□ -1.76
CARF-208	ENST00000428585	ZNF555	Q8NEP9	628 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	OR4D5	Q8NGN0	318 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	OR13C3	Q8NGS6	347 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	OR6X1	Q8NH79	312 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	SPATA22	Q8NHS9	363 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	HMGCLL1	Q8TB92	370 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	PCNP	Q8WW12	178 aa	Known RBP	4.05	□□□□□ -1.76
CARF-208	ENST00000428585	CCDC126	Q96EE4	140 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	PELI1	Q96FA3	418 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	P2RY11	Q96G91	374 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	MRPL45	Q9BRJ2	306 aa	Known RBP	4.05	□□□□□ -1.76
CARF-208	ENST00000428585	DUSP16	Q9BY84	665 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	NKX6-2	Q9C056	277 aa	Predicted RBP	4.05	□□□□□ -1.76
CARF-208	ENST00000428585	METTL9	Q9H1A3	318 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	RIMS4	Q9H426	269 aa	Predicted RBP	4.05	□□□□□ -1.76
CARF-208	ENST00000428585	POPDC2	Q9HBU9	364 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	LPAR2	Q9HBW0	351 aa		4.05	□□□□□ -1.76
CARF-208	ENST00000428585	ZNF469	Q96JG9	3925 aa	Predicted RBP	4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms