RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 SLC16A8O95907 504 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 CYB5R3P00387 301 aaPredicted RBP5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 TGFB1P01137 390 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 UMODP07911 640 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 ERCC1P07992 297 aaPredicted RBP5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 MMP3P08254 477 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 SOD3P08294 240 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 IGFBP1P08833 259 aaPredicted RBP5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 PIRTP0C851 137 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 TRGC1P0CF51 173 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 CTSAP10619 480 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 SCGB1A1P11684 91 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 RPS4Y1P22090 263 aaKnown RBP5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 OTX1P32242 354 aaPredicted RBP5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 CSNK1DP48730 415 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 PDLIM4P50479 330 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 NOVA1P51513 510 aaKnown RBP5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 RND2P52198 227 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 POLR2HP52434 150 aaKnown RBP5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 PRPS1P60891 318 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 RAB11AP62491 216 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 RBX1P62877 108 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 PAFAH1B2P68402 229 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 RAE1P78406 368 aaKnown RBP5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 JAG1P78504 1218 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 SRSF3P84103 164 aaKnown RBP5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 OR5I1Q13606 314 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 RUNX2Q13950 521 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 INSL4Q14641 139 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 OR7A5Q15622 319 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 KCNMB1Q16558 191 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 TMEM95Q3KNT9 176 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 AMZ1Q400G9 498 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 BEX5Q5H9J7 111 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 WSCD1Q658N2 575 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 KCNIP4Q6PIL6 250 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 DEGS2Q6QHC5 323 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 STAC2Q6ZMT1 411 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 ZNF705AQ6ZN79 300 aaPredicted RBP5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 FRRS1Q6ZNA5 592 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 ESPNLQ6ZVH7 1005 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 TTLL10Q6ZVT0 673 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 C16orf59Q7L2K0 433 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 BHLHA9Q7RTU4 235 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 NUFIP2Q7Z417 695 aaKnown RBP5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 GALNTL5Q7Z4T8 443 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 LRRTM4Q86VH4 590 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 GKN2Q86XP6 184 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 MCEMP1Q8IX19 187 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 ETFBKMTQ8IXQ9 262 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 SLC35F2Q8IXU6 374 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 OR2L13Q8N349 312 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 MTURNQ8N3F0 131 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 COX18Q8N8Q8 333 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 SLC38A9Q8NBW4 561 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 NAXEQ8NCW5 288 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 ZNF738Q8NE65 137 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 OR4D9Q8NGE8 314 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 OR4B1Q8NGF8 309 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 OR13C5Q8NGS8 318 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 OR5AK3PQ8NH89 298 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 RPS4Y2Q8TD47 263 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 HMGB4Q8WW32 186 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 DIO2Q92813 273 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 GLYATL1Q969I3 302 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 MOB3AQ96BX8 217 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 NTNG2Q96CW9 530 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 GNPNAT1Q96EK6 184 aaPredicted RBP5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 MVB12AQ96EY5 273 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 SLC35E1Q96K37 410 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 TGM7Q96PF1 710 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 LYSMD1Q96S90 227 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 MYADMQ96S97 322 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 BOCQ9BWV1 1114 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 TBL1XR1Q9BZK7 514 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 RAB33BQ9H082 229 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 OR52D1Q9H346 318 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 LPAR2Q9HBW0 351 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 MSL2Q9HCI7 577 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 DNAJC4Q9NNZ3 241 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 DMRT3Q9NQL9 472 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 OR2S2Q9NQN1 319 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 TDP1Q9NUW8 608 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 C1orf123Q9NWV4 160 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 FKBP11Q9NYL4 201 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 FOXJ2Q9P0K8 574 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 CHRNA9Q9UGM1 479 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 CCNL1Q9UK58 526 aaPredicted RBP5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 RNF150Q9ULK6 438 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 OSGIN2Q9Y236 505 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 NSG2Q9Y328 171 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 MED31Q9Y3C7 131 aa5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 PUS1Q9Y606 427 aaKnown RBP eCLIP5.07□□□□□ -1.6
VTI1BP4-201ENST00000427516 LOC100509620A0A075B734 347 aa5.06□□□□□ -1.6
VTI1BP4-201ENST00000427516 ANTXRLA6NF34 631 aa5.06□□□□□ -1.6
VTI1BP4-201ENST00000427516 NKX6-3A6NJ46 265 aa5.06□□□□□ -1.6
VTI1BP4-201ENST00000427516 PRSS47A8MTI9 375 aa5.06□□□□□ -1.6
VTI1BP4-201ENST00000427516 C1QTNF9BB2RNN3 333 aa5.06□□□□□ -1.6
VTI1BP4-201ENST00000427516 H3BQ15 152 aa5.06□□□□□ -1.6
VTI1BP4-201ENST00000427516 M0R3H8 397 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms