RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 P2RY8Q86VZ1 359 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 PLCZ1Q86YW0 608 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 CPOQ8IVL8 374 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 BEST3Q8N1M1 668 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 LRRC17Q8N6Y2 441 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 CLEC1AQ8NC01 280 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 ZNF248Q8NDW4 579 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 OR2M3Q8NG83 312 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 OR52E2Q8NGJ4 325 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 OR51G2Q8NGK0 314 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 OR52I1Q8NGK6 324 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 OR1J4Q8NGS1 313 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 OR13F1Q8NGS4 319 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 OR6K6Q8NGW6 343 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 OR5J2Q8NH18 312 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 OR4K13Q8NH42 304 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 GPR119Q8TDV5 335 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 RAB2BQ8WUD1 216 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 RAB40AQ8WXH6 277 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 SMPDL3BQ92485 455 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 TMIGD2Q96BF3 282 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 ISOC1Q96CN7 298 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 RASD2Q96D21 266 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 DGCR14Q96DF8 476 aaKnown RBP3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 NXPE2Q96DL1 559 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 DNAJA3Q96EY1 480 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 MRPL48Q96GC5 212 aaKnown RBP3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 TNFRSF13CQ96RJ3 184 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 GPX7Q96SL4 187 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 KATNB1Q9BVA0 655 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 RTN4RQ9BZR6 473 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 OR51V1Q9H2C8 321 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 HINT3Q9NQE9 182 aaKnown RBP3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 KLHL1Q9NR64 748 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 CMC2Q9NRP2 79 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 INIPQ9NRY2 104 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 TAS2R16Q9NYV7 291 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 CISD1Q9NZ45 108 aaKnown RBP3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 PTTG2Q9NZH5 202 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 ZNF224Q9NZL3 707 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 B4GALT7Q9UBV7 327 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 CHRNA9Q9UGM1 479 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 ZNF229Q9UJW7 825 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 KCNS2Q9ULS6 477 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 BOKQ9UMX3 212 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 DIMT1Q9UNQ2 313 aaKnown RBP3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 ERGIC3Q9Y282 383 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 IER3IP1Q9Y5U9 82 aa3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 ASCC3Q8N3C0 2202 aaKnown RBP3.35□□□□□ -1.87
HMGB3P20-201ENST00000417997 CABIN1Q9Y6J0 2220 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 IGLV3-32A0A0A0MS00 114 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 A0A1W2PRG6 482 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 ARGFXA6NJG6 315 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 GJE1A6NN92 205 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 CDRT15L2A8MXV6 281 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 NPIPA5E9PKD4 350 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 H3BMQ9 156 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 H3BSA7 217 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 ZNF701M0R085 212 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 IMPA2O14732 288 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 SLC30A4O14863 429 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 ARHGEF9O43307 516 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 ZNF208O43345 1280 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 IDH3BO43837 385 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 PTP4A3O75365 173 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 TRIM3O75382 744 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 SEC14L2O76054 403 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 GAGE7O76087 117 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 GABARAPO95166 117 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 NDUFB4O95168 129 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 SNX4O95219 450 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 F10P00742 488 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 PTHP01270 115 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 CRYAAP02489 173 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 CD14P08571 375 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 MRPL3P09001 348 aaKnown RBP3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 TSPAN19P0C672 248 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 ASAH2BP0C7U1 165 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 GAGE12FP0CL80 117 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 GAGE12GP0CL81 117 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 GAGE12IP0CL82 117 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 PRKAR1AP10644 381 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 LIFP15018 202 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 HIST1H1CP16403 213 aaKnown RBP3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 CD36P16671 472 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 ZNF17P17021 662 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 PCMT1P22061 227 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 F8A1P23610 371 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 DPP4P27487 766 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 GDF1P27539 372 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 DCKP27707 260 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 GRPRP30550 384 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 HTR1FP30939 366 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 SFTPDP35247 375 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 ACVR1BP36896 505 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 PEX19P40855 299 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 AQP2P41181 271 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 PTGDSP41222 190 aa3.34□□□□□ -1.87
HMGB3P20-201ENST00000417997 SLC15A1P46059 708 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms