RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 PDXPQ96GD0 296 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 SLIRPQ9GZT3 109 aaKnown RBP10.97□□□□□ -0.65
UBR4-205ENST00000417040 DUSP13Q9UII6 198 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 SIRPB1O00241 398 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 SIGLEC6O43699 453 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 DRD1P21728 446 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 IRS1P35568 1242 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 PMP22Q01453 160 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 CCDC190Q86UF4 302 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 PPP1R3BQ86XI6 285 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 OLIG1Q8TAK6 271 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 NXPE3Q969Y0 559 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 CABLES2Q9BTV7 478 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 SEMA6CQ9H3T2 930 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 LANCL2Q9NS86 450 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 SLCO1C1Q9NYB5 712 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 PTBP3O95758 552 aaKnown RBP10.97□□□□□ -0.65
UBR4-205ENST00000417040 LYG2Q86SG7 212 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 GRAMD2AQ8IUY3 354 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 ZNF561Q8N587 486 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 LFNGQ8NES3 379 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 PIGQQ9BRB3 760 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 MARCH5Q9NX47 278 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 A0A1W2PPQ1 181 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 ZNF320A2RRD8 509 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 G3V3Q6 166 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 H0Y8X5 98 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 TMEM189-UBE2V1I3L0A0 370 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 ANGPTL7O43827 346 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 MPGP29372 298 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 HOXC13P31276 330 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 CASP6P55212 293 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 LINC00696Q6ZRV3 163 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 USP51Q70EK9 711 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 LRP11Q86VZ4 500 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 SLC24A4Q8NFF2 622 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 OR51F2Q8NH61 342 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 CXorf58Q96LI9 332 aa10.97□□□□□ -0.65
UBR4-205ENST00000417040 A0A1W2PNR3 127 aa10.96□□□□□ -0.65
UBR4-205ENST00000417040 ONECUT2O95948 504 aa10.96□□□□□ -0.65
UBR4-205ENST00000417040 MBP02144 154 aa10.96□□□□□ -0.65
UBR4-205ENST00000417040 SSR4P51571 173 aa10.96□□□□□ -0.65
UBR4-205ENST00000417040 OR2A14Q96R47 310 aa10.96□□□□□ -0.65
UBR4-205ENST00000417040 TOLLIPQ9H0E2 274 aa10.96□□□□□ -0.65
UBR4-205ENST00000417040 NDRG3Q9UGV2 375 aa10.96□□□□□ -0.65
UBR4-205ENST00000417040 CYB5R1Q9UHQ9 305 aa10.96□□□□□ -0.65
UBR4-205ENST00000417040 TAAR5O14804 337 aa10.96□□□□□ -0.65
UBR4-205ENST00000417040 SLC25A6P12236 298 aa10.96□□□□□ -0.65
UBR4-205ENST00000417040 GPNMBQ14956 572 aa10.96□□□□□ -0.65
UBR4-205ENST00000417040 C21orf62-AS1Q17RA5 79 aa10.96□□□□□ -0.65
UBR4-205ENST00000417040 RPL7L1Q6DKI1 246 aaKnown RBP10.96□□□□□ -0.65
UBR4-205ENST00000417040 TCTN3Q6NUS6 607 aa10.96□□□□□ -0.65
UBR4-205ENST00000417040 OR10D4PQ8NGN7 298 aa10.96□□□□□ -0.65
UBR4-205ENST00000417040 TSLPQ969D9 159 aa10.96□□□□□ -0.65
UBR4-205ENST00000417040 DYNLRB1Q9NP97 96 aa10.96□□□□□ -0.65
UBR4-205ENST00000417040 GDF2Q9UK05 429 aaPredicted RBP10.96□□□□□ -0.65
UBR4-205ENST00000417040 A8MVM7 634 aa10.96□□□□□ -0.65
UBR4-205ENST00000417040 RNASEK-C17orf49H0YIS7 233 aa10.96□□□□□ -0.65
UBR4-205ENST00000417040 ECI1P42126 302 aa10.96□□□□□ -0.65
UBR4-205ENST00000417040 H1FNTQ75WM6 255 aaPredicted RBP10.96□□□□□ -0.65
UBR4-205ENST00000417040 GPR119Q8TDV5 335 aa10.96□□□□□ -0.65
UBR4-205ENST00000417040 POM121Q96HA1 1249 aa10.96□□□□□ -0.65
UBR4-205ENST00000417040 PARD6AQ9NPB6 346 aa10.96□□□□□ -0.65
UBR4-205ENST00000417040 RNF150Q9ULK6 438 aa10.96□□□□□ -0.65
UBR4-205ENST00000417040 CBY1Q9Y3M2 126 aa10.96□□□□□ -0.65
UBR4-205ENST00000417040 GSTP1P09211 210 aaKnown RBP10.96□□□□□ -0.66
UBR4-205ENST00000417040 CSNK1EP49674 416 aaKnown RBP10.96□□□□□ -0.66
UBR4-205ENST00000417040 BTG2P78543 158 aa10.96□□□□□ -0.66
UBR4-205ENST00000417040 HSF1Q00613 529 aa10.96□□□□□ -0.66
UBR4-205ENST00000417040 FABP9Q0Z7S8 132 aa10.96□□□□□ -0.66
UBR4-205ENST00000417040 ADAMTSL4Q6UY14 1074 aa10.96□□□□□ -0.66
UBR4-205ENST00000417040 CMBLQ96DG6 245 aa10.96□□□□□ -0.66
UBR4-205ENST00000417040 ANKUB1A6NFN9 424 aa10.96□□□□□ -0.66
UBR4-205ENST00000417040 NRG2O14511 850 aaPredicted RBP10.96□□□□□ -0.66
UBR4-205ENST00000417040 SPRY1O43609 319 aaPredicted RBP10.96□□□□□ -0.66
UBR4-205ENST00000417040 ICOSLGO75144 302 aa10.96□□□□□ -0.66
UBR4-205ENST00000417040 METTL15P1P0C7V9 234 aa10.96□□□□□ -0.66
UBR4-205ENST00000417040 EPXP11678 715 aa10.96□□□□□ -0.66
UBR4-205ENST00000417040 DEFA4P12838 97 aa10.96□□□□□ -0.66
UBR4-205ENST00000417040 CD38P28907 300 aa10.96□□□□□ -0.66
UBR4-205ENST00000417040 PIGPP57054 158 aa10.96□□□□□ -0.66
UBR4-205ENST00000417040 GRB2P62993 217 aaKnown RBP10.96□□□□□ -0.66
UBR4-205ENST00000417040 RPL18Q07020 188 aaKnown RBP10.96□□□□□ -0.66
UBR4-205ENST00000417040 MLF2Q15773 248 aaPredicted RBP10.96□□□□□ -0.66
UBR4-205ENST00000417040 ZNF626Q68DY1 528 aa10.96□□□□□ -0.66
UBR4-205ENST00000417040 DHRS4L2Q6PKH6 230 aa10.96□□□□□ -0.66
UBR4-205ENST00000417040 C17orf99Q6UX52 265 aa10.96□□□□□ -0.66
UBR4-205ENST00000417040 BAP18Q8IXM2 172 aa10.96□□□□□ -0.66
UBR4-205ENST00000417040 OR5B3Q8NH48 314 aa10.96□□□□□ -0.66
UBR4-205ENST00000417040 AKR7LQ8NHP1 331 aa10.96□□□□□ -0.66
UBR4-205ENST00000417040 CMTM2Q8TAZ6 248 aa10.96□□□□□ -0.66
UBR4-205ENST00000417040 PATE1Q8WXA2 126 aa10.96□□□□□ -0.66
UBR4-205ENST00000417040 SMIM19Q96E16 107 aa10.96□□□□□ -0.66
UBR4-205ENST00000417040 KIRREL1Q96J84 757 aa10.96□□□□□ -0.66
UBR4-205ENST00000417040 TMPRSS13Q9BYE2 586 aa10.96□□□□□ -0.66
UBR4-205ENST00000417040 KCNE3Q9Y6H6 103 aa10.96□□□□□ -0.66
UBR4-205ENST00000417040 A0A1B0GUL6 1792 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 IGLV3-10A0A075B6K4 115 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 AGFG1P52594 562 aaKnown RBP10.95□□□□□ -0.66
UBR4-205ENST00000417040 ZNF85Q03923 595 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms