RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 C8orf33Q9H7E9 229 aaPredicted RBP18.46■□□□□ 0.55
CLK3-202ENST00000395066 MKL2Q9ULH7 1088 aa18.46■□□□□ 0.55
CLK3-202ENST00000395066 MED12Q93074 2177 aa18.46■□□□□ 0.55
CLK3-202ENST00000395066 SHISA8B8ZZ34 492 aa18.45■□□□□ 0.54
CLK3-202ENST00000395066 P2RY10O00398 339 aa18.45■□□□□ 0.54
CLK3-202ENST00000395066 NPIPB7O75200 414 aa18.45■□□□□ 0.54
CLK3-202ENST00000395066 CD2P06729 351 aa18.45■□□□□ 0.54
CLK3-202ENST00000395066 CD96P40200 585 aa18.45■□□□□ 0.54
CLK3-202ENST00000395066 ROM1Q03395 351 aa18.45■□□□□ 0.54
CLK3-202ENST00000395066 PMPCAQ10713 525 aa18.45■□□□□ 0.54
CLK3-202ENST00000395066 ATXN7L3Q14CW9 347 aaPredicted RBP18.45■□□□□ 0.54
CLK3-202ENST00000395066 ELAVL1Q15717 326 aaKnown RBP18.45■□□□□ 0.54
CLK3-202ENST00000395066 SMAD2Q15796 467 aaKnown RBP18.45■□□□□ 0.54
CLK3-202ENST00000395066 ATPAF1Q5TC12 328 aaPredicted RBP18.45■□□□□ 0.54
CLK3-202ENST00000395066 KCTD18Q6PI47 426 aaPredicted RBP18.45■□□□□ 0.54
CLK3-202ENST00000395066 TMEM229BQ8NBD8 167 aa18.45■□□□□ 0.54
CLK3-202ENST00000395066 OR5M8Q8NGP6 311 aa18.45■□□□□ 0.54
CLK3-202ENST00000395066 SEC22AQ96IW7 307 aa18.45■□□□□ 0.54
CLK3-202ENST00000395066 SLC6A7Q99884 636 aa18.45■□□□□ 0.54
CLK3-202ENST00000395066 CENPMQ9NSP4 180 aa18.45■□□□□ 0.54
CLK3-202ENST00000395066 MED29Q9NX70 200 aa18.45■□□□□ 0.54
CLK3-202ENST00000395066 VSX1Q9NZR4 365 aaPredicted RBP18.45■□□□□ 0.54
CLK3-202ENST00000395066 WIPF3A6NGB9 483 aa18.45■□□□□ 0.54
CLK3-202ENST00000395066 DXOO77932 396 aaKnown RBP18.45■□□□□ 0.54
CLK3-202ENST00000395066 IGFBP3P17936 291 aaPredicted RBP18.45■□□□□ 0.54
CLK3-202ENST00000395066 POLR2HP52434 150 aaKnown RBP18.45■□□□□ 0.54
CLK3-202ENST00000395066 ZNF345Q14585 488 aa18.45■□□□□ 0.54
CLK3-202ENST00000395066 GVQW1Q8N7I0 195 aa18.45■□□□□ 0.54
CLK3-202ENST00000395066 ZNF75AQ96N20 296 aa18.45■□□□□ 0.54
CLK3-202ENST00000395066 SAV1Q9H4B6 383 aaPredicted RBP18.45■□□□□ 0.54
CLK3-202ENST00000395066 PURGQ9UJV8 347 aaKnown RBP18.45■□□□□ 0.54
CLK3-202ENST00000395066 TNFSF18Q9UNG2 199 aa18.45■□□□□ 0.54
CLK3-202ENST00000395066 A0A1B0GTI1 187 aa18.44■□□□□ 0.54
CLK3-202ENST00000395066 H3BMH7 237 aa18.44■□□□□ 0.54
CLK3-202ENST00000395066 BCL2L11O43521 198 aa18.44■□□□□ 0.54
CLK3-202ENST00000395066 OR2F2O95006 317 aa18.44■□□□□ 0.54
CLK3-202ENST00000395066 OR2F1Q13607 317 aa18.44■□□□□ 0.54
CLK3-202ENST00000395066 TMEM185AQ8NFB2 350 aa18.44■□□□□ 0.54
CLK3-202ENST00000395066 VRK1Q99986 396 aaPredicted RBP18.44■□□□□ 0.54
CLK3-202ENST00000395066 CABIN1Q9Y6J0 2220 aa18.44■□□□□ 0.54
CLK3-202ENST00000395066 A8MVM7 634 aa18.44■□□□□ 0.54
CLK3-202ENST00000395066 SULT1C2O00338 296 aa18.44■□□□□ 0.54
CLK3-202ENST00000395066 GP1BAP07359 652 aa18.44■□□□□ 0.54
CLK3-202ENST00000395066 ARRB1P49407 418 aaPredicted RBP18.44■□□□□ 0.54
CLK3-202ENST00000395066 CTAG1AP78358 180 aa18.44■□□□□ 0.54
CLK3-202ENST00000395066 GLO1Q04760 184 aa18.44■□□□□ 0.54
CLK3-202ENST00000395066 SHEQ5VZ18 495 aa18.44■□□□□ 0.54
CLK3-202ENST00000395066 OR52W1Q6IF63 320 aa18.44■□□□□ 0.54
CLK3-202ENST00000395066 C11orf87Q6NUJ2 197 aa18.44■□□□□ 0.54
CLK3-202ENST00000395066 OR2W3Q7Z3T1 314 aa18.44■□□□□ 0.54
CLK3-202ENST00000395066 BPIFB2Q8N4F0 458 aa18.44■□□□□ 0.54
CLK3-202ENST00000395066 THRSPQ92748 146 aa18.44■□□□□ 0.54
CLK3-202ENST00000395066 ZNF471Q9BX82 626 aaPredicted RBP18.44■□□□□ 0.54
CLK3-202ENST00000395066 G6PC2Q9NQR9 355 aa18.44■□□□□ 0.54
CLK3-202ENST00000395066 MMACHCQ9Y4U1 282 aa18.44■□□□□ 0.54
CLK3-202ENST00000395066 LILRA5A6NI73 299 aa18.43■□□□□ 0.54
CLK3-202ENST00000395066 ZNF354AO60765 605 aaPredicted RBP18.43■□□□□ 0.54
CLK3-202ENST00000395066 MTRF1O75570 445 aaKnown RBP18.43■□□□□ 0.54
CLK3-202ENST00000395066 CYB5AP00167 134 aa18.43■□□□□ 0.54
CLK3-202ENST00000395066 MT-ATP6P00846 226 aa18.43■□□□□ 0.54
CLK3-202ENST00000395066 ZNF735P0CB33 412 aa18.43■□□□□ 0.54
CLK3-202ENST00000395066 NME1P15531 152 aaKnown RBP18.43■□□□□ 0.54
CLK3-202ENST00000395066 DHRS2Q13268 280 aa18.43■□□□□ 0.54
CLK3-202ENST00000395066 ADGRE4PQ86SQ3 457 aa18.43■□□□□ 0.54
CLK3-202ENST00000395066 OR13C8Q8NGS7 320 aa18.43■□□□□ 0.54
CLK3-202ENST00000395066 PDCD10Q9BUL8 212 aa18.43■□□□□ 0.54
CLK3-202ENST00000395066 MYOZ1Q9NP98 299 aaPredicted RBP18.43■□□□□ 0.54
CLK3-202ENST00000395066 COMMD9Q9P000 198 aa18.43■□□□□ 0.54
CLK3-202ENST00000395066 CTSFQ9UBX1 484 aa18.43■□□□□ 0.54
CLK3-202ENST00000395066 CYB5R1Q9UHQ9 305 aa18.43■□□□□ 0.54
CLK3-202ENST00000395066 HSPB2A8KAH6 182 aa18.43■□□□□ 0.54
CLK3-202ENST00000395066 ZNF736B4DX44 427 aaPredicted RBP18.43■□□□□ 0.54
CLK3-202ENST00000395066 KCNAB3O43448 404 aa18.43■□□□□ 0.54
CLK3-202ENST00000395066 SIGLEC6O43699 453 aa18.43■□□□□ 0.54
CLK3-202ENST00000395066 AHSA1O95433 338 aa18.43■□□□□ 0.54
CLK3-202ENST00000395066 FOLR1P15328 257 aa18.43■□□□□ 0.54
CLK3-202ENST00000395066 CD34P28906 385 aa18.43■□□□□ 0.54
CLK3-202ENST00000395066 TAF13Q15543 124 aa18.43■□□□□ 0.54
CLK3-202ENST00000395066 OR7A5Q15622 319 aa18.43■□□□□ 0.54
CLK3-202ENST00000395066 HSPB2Q16082 182 aa18.43■□□□□ 0.54
CLK3-202ENST00000395066 GKN2Q86XP6 184 aa18.43■□□□□ 0.54
CLK3-202ENST00000395066 EMC6Q9BV81 110 aa18.43■□□□□ 0.54
CLK3-202ENST00000395066 VN1R1Q9GZP7 353 aa18.43■□□□□ 0.54
CLK3-202ENST00000395066 OR52A1Q9UKL2 312 aa18.43■□□□□ 0.54
CLK3-202ENST00000395066 VDAC3Q9Y277 283 aa18.43■□□□□ 0.54
CLK3-202ENST00000395066 TMEM269A0A1B0GVZ9 245 aa18.42■□□□□ 0.54
CLK3-202ENST00000395066 SRSF10O75494 262 aaKnown RBP18.42■□□□□ 0.54
CLK3-202ENST00000395066 OPN1LWP04000 364 aa18.42■□□□□ 0.54
CLK3-202ENST00000395066 SLC25A4P12235 298 aa18.42■□□□□ 0.54
CLK3-202ENST00000395066 ARL4DP49703 201 aa18.42■□□□□ 0.54
CLK3-202ENST00000395066 SRSF4Q08170 494 aaKnown RBP18.42■□□□□ 0.54
CLK3-202ENST00000395066 TOMM20Q15388 145 aa18.42■□□□□ 0.54
CLK3-202ENST00000395066 LPCAT3Q6P1A2 487 aa18.42■□□□□ 0.54
CLK3-202ENST00000395066 NUP54Q7Z3B4 507 aa18.42■□□□□ 0.54
CLK3-202ENST00000395066 RNF144BQ7Z419 303 aa18.42■□□□□ 0.54
CLK3-202ENST00000395066 CCDC36Q8IYA8 594 aa18.42■□□□□ 0.54
CLK3-202ENST00000395066 PHYHIPLQ96FC7 376 aa18.42■□□□□ 0.54
CLK3-202ENST00000395066 MICU1Q9BPX6 476 aa18.42■□□□□ 0.54
CLK3-202ENST00000395066 COPS7AQ9UBW8 275 aa18.42■□□□□ 0.54
CLK3-202ENST00000395066 FBXO9Q9UK97 447 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms