RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 OGG1O15527 345 aa15.76■□□□□ 0.11
PTPRU-202ENST00000373779 DPP4P27487 766 aa15.76■□□□□ 0.11
PTPRU-202ENST00000373779 VWA2Q5GFL6 755 aa15.76■□□□□ 0.11
PTPRU-202ENST00000373779 WDR38Q5JTN6 314 aa15.76■□□□□ 0.11
PTPRU-202ENST00000373779 MUC20Q8N307 709 aaPredicted RBP15.76■□□□□ 0.11
PTPRU-202ENST00000373779 C14orf79Q96F83 325 aa15.76■□□□□ 0.11
PTPRU-202ENST00000373779 SPACA5Q96QH8 159 aa15.76■□□□□ 0.11
PTPRU-202ENST00000373779 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.76■□□□□ 0.11
PTPRU-202ENST00000373779 A0A1W2PPV9 198 aa15.76■□□□□ 0.11
PTPRU-202ENST00000373779 EIF1BO60739 113 aaKnown RBP15.76■□□□□ 0.11
PTPRU-202ENST00000373779 ALOX12BO75342 701 aa15.76■□□□□ 0.11
PTPRU-202ENST00000373779 LBX1P52954 281 aa15.76■□□□□ 0.11
PTPRU-202ENST00000373779 GALNT16Q8N428 558 aa15.76■□□□□ 0.11
PTPRU-202ENST00000373779 SLC30A7Q8NEW0 376 aa15.76■□□□□ 0.11
PTPRU-202ENST00000373779 ST7LQ8TDW4 575 aa15.76■□□□□ 0.11
PTPRU-202ENST00000373779 CPNE4Q96A23 557 aaPredicted RBP15.76■□□□□ 0.11
PTPRU-202ENST00000373779 PBOV1Q9GZY1 135 aa15.76■□□□□ 0.11
PTPRU-202ENST00000373779 TCEAL2Q9H3H9 227 aaPredicted RBP15.76■□□□□ 0.11
PTPRU-202ENST00000373779 TMEM231Q9H6L2 316 aa15.76■□□□□ 0.11
PTPRU-202ENST00000373779 MMP17Q9ULZ9 603 aa15.76■□□□□ 0.11
PTPRU-202ENST00000373779 SLC5A6Q9Y289 635 aa15.76■□□□□ 0.11
PTPRU-202ENST00000373779 TMEM184BQ9Y519 407 aaPredicted RBP15.76■□□□□ 0.11
PTPRU-202ENST00000373779 BCAT2O15382 392 aaPredicted RBP15.76■□□□□ 0.11
PTPRU-202ENST00000373779 GDF1P27539 372 aa15.76■□□□□ 0.11
PTPRU-202ENST00000373779 DRD3P35462 400 aa15.76■□□□□ 0.11
PTPRU-202ENST00000373779 ZNF425Q6IV72 752 aa15.76■□□□□ 0.11
PTPRU-202ENST00000373779 C11orf87Q6NUJ2 197 aa15.76■□□□□ 0.11
PTPRU-202ENST00000373779 OR4C3Q8NH37 302 aa15.76■□□□□ 0.11
PTPRU-202ENST00000373779 ASH2LQ9UBL3 628 aa15.76■□□□□ 0.11
PTPRU-202ENST00000373779 FBXO4Q9UKT5 387 aa15.76■□□□□ 0.11
PTPRU-202ENST00000373779 CLINT1Q14677 625 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 SECTM1Q8WVN6 248 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 MED29Q9NX70 200 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 MRPS2Q9Y399 296 aaKnown RBP15.75■□□□□ 0.11
PTPRU-202ENST00000373779 NSG1A0A0A6YYJ2 146 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 SULT1A3P0DMM9 295 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 SULT1A4P0DMN0 295 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 CD27P26842 260 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 HOXD11P31277 338 aaPredicted RBP15.75■□□□□ 0.11
PTPRU-202ENST00000373779 SCAND1P57086 179 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 UBE2NP61088 152 aaKnown RBP15.75■□□□□ 0.11
PTPRU-202ENST00000373779 PHLDA2Q53GA4 152 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 ANKRD16Q6P6B7 361 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 NHLRC1Q6VVB1 395 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 CHAC2Q8WUX2 184 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 ST8SIA1Q92185 356 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 PTP4A1Q93096 173 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 OIP5O43482 229 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 LAP3P28838 519 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 ZNF266Q14584 549 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 THEM4Q5T1C6 240 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 ZFP82Q8N141 532 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 LGI3Q8N145 548 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 OR4D9Q8NGE8 314 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 OR6K3Q8NGY3 331 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 C10orf90Q96M02 699 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 ZNF681Q96N22 645 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 LRP12Q9Y561 859 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.75■□□□□ 0.11
PTPRU-202ENST00000373779 GPR85P60893 370 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 PAN3Q58A45 887 aaKnown RBP15.75■□□□□ 0.11
PTPRU-202ENST00000373779 AAED1Q7RTV5 226 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 ZNF687Q8N1G0 1237 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 C4orf45Q96LM5 186 aa15.75■□□□□ 0.11
PTPRU-202ENST00000373779 NXT1Q9UKK6 140 aaKnown RBP15.75■□□□□ 0.11
PTPRU-202ENST00000373779 LANCL1O43813 399 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 CTAG2O75638 210 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 PLA1AQ53H76 456 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 SLC22A25Q6T423 547 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 SLC25A43Q8WUT9 341 aaPredicted RBP15.74■□□□□ 0.11
PTPRU-202ENST00000373779 GPR84Q9NQS5 396 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 DSPPQ9NZW4 1301 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 ZNF44P15621 663 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 PNLIPRP2P54317 469 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 IFITM2Q01629 132 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 WDR5BQ86VZ2 330 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 PLPP5Q8NEB5 264 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 RAB19A4D1S5 217 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 CDKN2AP42771 156 aaKnown RBP15.74■□□□□ 0.11
PTPRU-202ENST00000373779 ABHD17BQ5VST6 288 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 CLRN3Q8NCR9 226 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 OR4S1Q8NGB4 309 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 EDAQ92838 391 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 MALSU1Q96EH3 234 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 CDH20Q9HBT6 801 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 NINQ8N4C6 2090 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 TMEM272A0A1B0GTI8 110 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 JTBO76095 146 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 HBE1P02100 147 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 CT62P0C5K7 136 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 PI3P19957 117 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 TLE4Q04727 773 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 ETFBKMTQ8IXQ9 262 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 PSMF1Q92530 271 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 TAAR8Q969N4 342 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 MRPL38Q96DV4 380 aaKnown RBP15.74■□□□□ 0.11
PTPRU-202ENST00000373779 NUDT9Q9BW91 350 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 PCDHGA5Q9Y5G8 931 aa15.74■□□□□ 0.11
PTPRU-202ENST00000373779 SDCBPO00560 298 aaPredicted RBP15.73■□□□□ 0.11
PTPRU-202ENST00000373779 CCR5P51681 352 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 186.8 ms