RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 POMGNT2Q8NAT1 580 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 MCHR2Q969V1 340 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 KCTD12Q96CX2 325 aaKnown RBP12.99□□□□□ -0.33
CXCL12-201ENST00000343575 ATF6BQ99941 703 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 ARHGAP9Q9BRR9 750 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 MED28Q9H204 178 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 MED12LQ86YW9 2145 aa12.99□□□□□ -0.33
CXCL12-201ENST00000343575 ZNF726A6NNF4 738 aa12.98□□□□□ -0.33
CXCL12-201ENST00000343575 IFNA7P01567 189 aa12.98□□□□□ -0.33
CXCL12-201ENST00000343575 SLC6A1P30531 599 aa12.98□□□□□ -0.33
CXCL12-201ENST00000343575 RPS27P42677 84 aaKnown RBP12.98□□□□□ -0.33
CXCL12-201ENST00000343575 ZNF133P52736 654 aaPredicted RBP12.98□□□□□ -0.33
CXCL12-201ENST00000343575 CLRN1P58418 232 aa12.98□□□□□ -0.33
CXCL12-201ENST00000343575 POU4F2Q12837 409 aa12.98□□□□□ -0.33
CXCL12-201ENST00000343575 MEP1BQ16820 701 aa12.98□□□□□ -0.33
CXCL12-201ENST00000343575 TEX261Q6UWH6 196 aa12.98□□□□□ -0.33
CXCL12-201ENST00000343575 ZNF431Q8TF32 576 aaPredicted RBP12.98□□□□□ -0.33
CXCL12-201ENST00000343575 CNN2Q99439 309 aaKnown RBP12.98□□□□□ -0.33
CXCL12-201ENST00000343575 CLCF1Q9UBD9 225 aa12.98□□□□□ -0.33
CXCL12-201ENST00000343575 SLC23A1Q9UHI7 598 aa12.98□□□□□ -0.33
CXCL12-201ENST00000343575 MCTS1Q9ULC4 181 aaKnown RBP12.98□□□□□ -0.33
CXCL12-201ENST00000343575 KLHDC2Q9Y2U9 406 aa12.98□□□□□ -0.33
CXCL12-201ENST00000343575 U3KQ87 197 aa12.98□□□□□ -0.33
CXCL12-201ENST00000343575 A0A1B0GVI7 797 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 C7orf66A4D0T2 115 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 TMEM8BA6NDV4 472 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 AKAP8O43823 692 aaKnown RBP12.97□□□□□ -0.33
CXCL12-201ENST00000343575 SYNGR4O95473 234 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 CRYABP02511 175 aaKnown RBP12.97□□□□□ -0.33
CXCL12-201ENST00000343575 QDPRP09417 244 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 STOMP27105 288 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 CD276Q5ZPR3 534 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 TUSC5Q8IXB3 177 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 CISD2Q8N5K1 135 aaKnown RBP12.97□□□□□ -0.33
CXCL12-201ENST00000343575 SLC26A10Q8NG04 563 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 OR10H4Q8NGA5 316 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 OR5M9Q8NGP3 310 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 NSMAFQ92636 917 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 TMEM203Q969S6 136 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 ZNF837Q96EG3 531 aaPredicted RBP12.97□□□□□ -0.33
CXCL12-201ENST00000343575 RBP7Q96R05 134 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 ISG20L2Q9H9L3 353 aaKnown RBP12.97□□□□□ -0.33
CXCL12-201ENST00000343575 BCO1Q9HAY6 547 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 COPZ2Q9P299 210 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 RCE1Q9Y256 329 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 CACNA1CQ13936 2221 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 MAGEB4O15481 346 aaPredicted RBP12.97□□□□□ -0.33
CXCL12-201ENST00000343575 HPGDSO60760 199 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 LALBAP00709 142 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 RAF1P04049 648 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 OR2T7P0C7T2 308 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 ANXA3P12429 323 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 TALDO1P37837 337 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 TDGF1P3P51864 188 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 RAG2P55895 527 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 FABP5Q01469 135 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 GALEQ14376 348 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 ZNF57Q68EA5 555 aaPredicted RBP12.97□□□□□ -0.33
CXCL12-201ENST00000343575 LINGO2Q7L985 606 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 SLC16A9Q7RTY1 509 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 CDC20BQ86Y33 519 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 SLC35F2Q8IXU6 374 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 C20orf196Q8IYI0 205 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 ZNF680Q8NEM1 530 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 OR2T27Q8NH04 317 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 TMEM45BQ96B21 275 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 SARAFQ96BY9 339 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 B3GAT2Q9NPZ5 323 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 KLHL9Q9P2J3 617 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 ZMIZ1Q9ULJ6 1067 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 CLEC4AQ9UMR7 237 aa12.97□□□□□ -0.33
CXCL12-201ENST00000343575 ACACBO00763 2458 aa12.96□□□□□ -0.33
CXCL12-201ENST00000343575 ATRXP46100 2492 aa12.96□□□□□ -0.33
CXCL12-201ENST00000343575 PKD1L2Q7Z442 2459 aa12.96□□□□□ -0.33
CXCL12-201ENST00000343575 DAPL1A0PJW8 107 aa12.96□□□□□ -0.33
CXCL12-201ENST00000343575 OR14I1A6ND48 311 aa12.96□□□□□ -0.33
CXCL12-201ENST00000343575 KHDRBS3O75525 346 aaKnown RBP12.96□□□□□ -0.33
CXCL12-201ENST00000343575 UPK3AO75631 287 aa12.96□□□□□ -0.33
CXCL12-201ENST00000343575 C4BPBP20851 252 aa12.96□□□□□ -0.33
CXCL12-201ENST00000343575 SNRPD2P62316 118 aaKnown RBP12.96□□□□□ -0.33
CXCL12-201ENST00000343575 BDH1Q02338 343 aa12.96□□□□□ -0.33
CXCL12-201ENST00000343575 HSF2Q03933 536 aa12.96□□□□□ -0.33
CXCL12-201ENST00000343575 GLO1Q04760 184 aa12.96□□□□□ -0.33
CXCL12-201ENST00000343575 PRR30Q53SZ7 412 aaPredicted RBP12.96□□□□□ -0.33
CXCL12-201ENST00000343575 CLLU1Q5K131 121 aa12.96□□□□□ -0.33
CXCL12-201ENST00000343575 ZNF684Q5T5D7 378 aa12.96□□□□□ -0.33
CXCL12-201ENST00000343575 AAED1Q7RTV5 226 aa12.96□□□□□ -0.33
CXCL12-201ENST00000343575 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.96□□□□□ -0.33
CXCL12-201ENST00000343575 DPY19L4Q7Z388 723 aa12.96□□□□□ -0.33
CXCL12-201ENST00000343575 LRRC28Q86X40 367 aaPredicted RBP12.96□□□□□ -0.33
CXCL12-201ENST00000343575 UBE2J2Q8N2K1 259 aa12.96□□□□□ -0.33
CXCL12-201ENST00000343575 OR52N1Q8NH53 320 aa12.96□□□□□ -0.33
CXCL12-201ENST00000343575 GATAD2BQ8WXI9 593 aa12.96□□□□□ -0.33
CXCL12-201ENST00000343575 AMELYQ99218 206 aa12.96□□□□□ -0.33
CXCL12-201ENST00000343575 ALG8Q9BVK2 526 aa12.96□□□□□ -0.33
CXCL12-201ENST00000343575 KCNN2Q9H2S1 579 aa12.96□□□□□ -0.33
CXCL12-201ENST00000343575 NARFLQ9H6Q4 476 aa12.96□□□□□ -0.33
CXCL12-201ENST00000343575 RNF122Q9H9V4 155 aa12.96□□□□□ -0.33
CXCL12-201ENST00000343575 ZNF275Q9NSD4 429 aaPredicted RBP12.96□□□□□ -0.33
CXCL12-201ENST00000343575 EMC3Q9P0I2 261 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms