RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 SEMG1P04279 462 aa16.19■□□□□ 0.18
CCDC28A-203ENST00000617445 KITLGP21583 273 aa16.19■□□□□ 0.18
CCDC28A-203ENST00000617445 TNFSF4P23510 183 aa16.19■□□□□ 0.18
CCDC28A-203ENST00000617445 RGS6P49758 472 aa16.19■□□□□ 0.18
CCDC28A-203ENST00000617445 CDK5R2Q13319 367 aa16.19■□□□□ 0.18
CCDC28A-203ENST00000617445 RINLQ6ZS11 566 aa16.19■□□□□ 0.18
CCDC28A-203ENST00000617445 CCL17Q92583 94 aa16.19■□□□□ 0.18
CCDC28A-203ENST00000617445 NSMCE2Q96MF7 247 aa16.19■□□□□ 0.18
CCDC28A-203ENST00000617445 NUAK2Q9H093 628 aa16.19■□□□□ 0.18
CCDC28A-203ENST00000617445 RERGLQ9H628 205 aa16.19■□□□□ 0.18
CCDC28A-203ENST00000617445 ARL2BPQ9Y2Y0 163 aa16.19■□□□□ 0.18
CCDC28A-203ENST00000617445 TANC2Q9HCD6 1990 aa16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 A0A0A6YYJ9 748 aa16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 OR6C6A6NF89 314 aa16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 IDH3BO43837 385 aa16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 DCTN3O75935 186 aa16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 DIRAS1O95057 198 aa16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 FPR3P25089 353 aa16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 SLC6A6P31641 620 aa16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 CDKN2AP42771 156 aaKnown RBP16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 MNAT1P51948 309 aa16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 FXYD6P3P58550 94 aa16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 SPIBQ01892 262 aa16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 RFX4Q33E94 735 aa16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 TMEM255AQ5JRV8 349 aa16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 AVPI1Q5T686 147 aa16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 C16orf89Q6UX73 402 aa16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 GJC3Q8NFK1 279 aa16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 OR5L1Q8NGL2 311 aa16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 OR1F12Q8NHA8 337 aa16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 PTP4A1Q93096 173 aa16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 HAVCR1Q96D42 359 aa16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 CDRT15Q96T59 188 aa16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 C19orf24Q9BVV8 132 aa16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 LPAR2Q9HBW0 351 aa16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 IL1RAPQ9NPH3 570 aa16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 ASH2LQ9UBL3 628 aa16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 IL20RAQ9UHF4 553 aa16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 PURGQ9UJV8 347 aaKnown RBP16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 TMCC3Q9ULS5 477 aa16.18■□□□□ 0.18
CCDC28A-203ENST00000617445 DYSFO75923 2080 aa16.17■□□□□ 0.18
CCDC28A-203ENST00000617445 DEAF1O75398 565 aaPredicted RBP16.17■□□□□ 0.18
CCDC28A-203ENST00000617445 PNPP00491 289 aa16.17■□□□□ 0.18
CCDC28A-203ENST00000617445 IGHV2-5P01817 119 aa16.17■□□□□ 0.18
CCDC28A-203ENST00000617445 FABP3P05413 133 aa16.17■□□□□ 0.18
CCDC28A-203ENST00000617445 TNFRSF1AP19438 455 aa16.17■□□□□ 0.18
CCDC28A-203ENST00000617445 TNFAIP6P98066 277 aaPredicted RBP16.17■□□□□ 0.18
CCDC28A-203ENST00000617445 SHQ1Q6PI26 577 aaKnown RBP16.17■□□□□ 0.18
CCDC28A-203ENST00000617445 PTCHD4Q6ZW05 846 aa16.17■□□□□ 0.18
CCDC28A-203ENST00000617445 PIGWQ7Z7B1 504 aa16.17■□□□□ 0.18
CCDC28A-203ENST00000617445 FANK1Q8TC84 345 aa16.17■□□□□ 0.18
CCDC28A-203ENST00000617445 CMBLQ96DG6 245 aa16.17■□□□□ 0.18
CCDC28A-203ENST00000617445 SAMD8Q96LT4 415 aa16.17■□□□□ 0.18
CCDC28A-203ENST00000617445 ERMAPQ96PL5 475 aaPredicted RBP16.17■□□□□ 0.18
CCDC28A-203ENST00000617445 GPA33Q99795 319 aa16.17■□□□□ 0.18
CCDC28A-203ENST00000617445 MSL2Q9HCI7 577 aa16.17■□□□□ 0.18
CCDC28A-203ENST00000617445 POLR1DQ9Y2S0 133 aa16.17■□□□□ 0.18
CCDC28A-203ENST00000617445 STARD10Q9Y365 291 aa16.17■□□□□ 0.18
CCDC28A-203ENST00000617445 A0A0G2JMP0 313 aa16.16■□□□□ 0.18
CCDC28A-203ENST00000617445 A0A0X1KG70 313 aa16.16■□□□□ 0.18
CCDC28A-203ENST00000617445 ARPC2O15144 300 aa16.16■□□□□ 0.18
CCDC28A-203ENST00000617445 SURF4O15260 269 aa16.16■□□□□ 0.18
CCDC28A-203ENST00000617445 OR10H3O60404 316 aa16.16■□□□□ 0.18
CCDC28A-203ENST00000617445 KRT36O76013 467 aa16.16■□□□□ 0.18
CCDC28A-203ENST00000617445 MPZL1O95297 269 aa16.16■□□□□ 0.18
CCDC28A-203ENST00000617445 RENP00797 406 aa16.16■□□□□ 0.18
CCDC28A-203ENST00000617445 RAC2P15153 192 aa16.16■□□□□ 0.18
CCDC28A-203ENST00000617445 GATA3P23771 443 aa16.16■□□□□ 0.18
CCDC28A-203ENST00000617445 GNGT1P63211 74 aa16.16■□□□□ 0.18
CCDC28A-203ENST00000617445 CCDC92Q53HC0 331 aaPredicted RBP16.16■□□□□ 0.18
CCDC28A-203ENST00000617445 FAHD2BQ6P2I3 314 aaPredicted RBP16.16■□□□□ 0.18
CCDC28A-203ENST00000617445 JAZF1Q86VZ6 243 aa16.16■□□□□ 0.18
CCDC28A-203ENST00000617445 OR4M2Q8NGB6 313 aa16.16■□□□□ 0.18
CCDC28A-203ENST00000617445 FAHD2AQ96GK7 314 aa16.16■□□□□ 0.18
CCDC28A-203ENST00000617445 COQ7Q99807 217 aa16.16■□□□□ 0.18
CCDC28A-203ENST00000617445 HDHD2Q9H0R4 259 aa16.16■□□□□ 0.18
CCDC28A-203ENST00000617445 OR52D1Q9H346 318 aa16.16■□□□□ 0.18
CCDC28A-203ENST00000617445 G6PC2Q9NQR9 355 aa16.16■□□□□ 0.18
CCDC28A-203ENST00000617445 CACNG2Q9Y698 323 aa16.16■□□□□ 0.18
CCDC28A-203ENST00000617445 V9GYQ6 96 aa16.16■□□□□ 0.18
CCDC28A-203ENST00000617445 J3QLI3 93 aa16.15■□□□□ 0.18
CCDC28A-203ENST00000617445 PLPP2O43688 288 aa16.15■□□□□ 0.18
CCDC28A-203ENST00000617445 PPP1R3DO95685 299 aa16.15■□□□□ 0.18
CCDC28A-203ENST00000617445 GYS2P54840 703 aa16.15■□□□□ 0.18
CCDC28A-203ENST00000617445 HIST1H3AP68431 136 aa16.15■□□□□ 0.18
CCDC28A-203ENST00000617445 SLC36A3Q495N2 470 aa16.15■□□□□ 0.18
CCDC28A-203ENST00000617445 HIST2H3PS2Q5TEC6 136 aa16.15■□□□□ 0.18
CCDC28A-203ENST00000617445 SLC27A4Q6P1M0 643 aa16.15■□□□□ 0.18
CCDC28A-203ENST00000617445 C1orf94Q6P1W5 598 aa16.15■□□□□ 0.18
CCDC28A-203ENST00000617445 HIST2H3AQ71DI3 136 aa16.15■□□□□ 0.18
CCDC28A-203ENST00000617445 LINC00471Q8N535 108 aa16.15■□□□□ 0.18
CCDC28A-203ENST00000617445 GNPDA2Q8TDQ7 276 aa16.15■□□□□ 0.18
CCDC28A-203ENST00000617445 APOBEC3DQ96AK3 386 aaPredicted RBP16.15■□□□□ 0.18
CCDC28A-203ENST00000617445 GAL3ST1Q99999 423 aa16.15■□□□□ 0.18
CCDC28A-203ENST00000617445 IFT27Q9BW83 186 aa16.15■□□□□ 0.18
CCDC28A-203ENST00000617445 METTL17Q9H7H0 456 aaPredicted RBP16.15■□□□□ 0.18
CCDC28A-203ENST00000617445 ARL8BQ9NVJ2 186 aa16.15■□□□□ 0.18
CCDC28A-203ENST00000617445 IL19Q9UHD0 177 aa16.15■□□□□ 0.18
CCDC28A-203ENST00000617445 B9D1Q9UPM9 204 aa16.15■□□□□ 0.18
CCDC28A-203ENST00000617445 IGLV1-36A0A0B4J1U3 117 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms