RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 IL1RNP18510 177 aa2.28□□□□□ -2.04
SCAMP1-205ENST00000614488 UBE2NP61088 152 aaKnown RBP2.28□□□□□ -2.04
SCAMP1-205ENST00000614488 CDH17Q12864 832 aa2.28□□□□□ -2.04
SCAMP1-205ENST00000614488 AVPI1Q5T686 147 aa2.28□□□□□ -2.04
SCAMP1-205ENST00000614488 CLEC2AQ6UVW9 174 aa2.28□□□□□ -2.04
SCAMP1-205ENST00000614488 SLC16A13Q7RTY0 426 aa2.28□□□□□ -2.04
SCAMP1-205ENST00000614488 BBS5Q8N3I7 341 aa2.28□□□□□ -2.04
SCAMP1-205ENST00000614488 MS4A15Q8N5U1 240 aa2.28□□□□□ -2.04
SCAMP1-205ENST00000614488 OR8J1Q8NGP2 316 aa2.28□□□□□ -2.04
SCAMP1-205ENST00000614488 OR1S2Q8NGQ3 325 aa2.28□□□□□ -2.04
SCAMP1-205ENST00000614488 PLPPR1Q8TBJ4 325 aa2.28□□□□□ -2.04
SCAMP1-205ENST00000614488 ZBTB18Q99592 522 aa2.28□□□□□ -2.04
SCAMP1-205ENST00000614488 ROPN1BQ9BZX4 212 aaPredicted RBP2.28□□□□□ -2.04
SCAMP1-205ENST00000614488 OR52D1Q9H346 318 aa2.28□□□□□ -2.04
SCAMP1-205ENST00000614488 RPRD1BQ9NQG5 326 aaKnown RBP2.28□□□□□ -2.04
SCAMP1-205ENST00000614488 SLC7A8Q9UHI5 535 aa2.28□□□□□ -2.04
SCAMP1-205ENST00000614488 EIF4G1Q04637 1599 aaKnown RBP2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 ADGRL1O94910 1474 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 CENPVL3A0A0U1RRI6 287 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 GOLGA6L7A0A1B0GV03 622 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 M0QX08 132 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 PPP1R2P9O14990 202 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 CBR3O75828 277 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 PAHP00439 452 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 SERPINA3P01011 423 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 ZNF735P0CB33 412 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 OR5H8P0DN80 308 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 GALP22466 123 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 COL8A2P25067 703 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 CASP14P31944 242 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 OR1G1P47890 313 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 KRTAP12-4P60329 112 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 RCN1Q15293 331 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 HADHQ16836 314 aaKnown RBP2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 ANKRD26P1Q6NSI1 321 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 WDFY1Q8IWB7 410 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 ST20-AS1Q8NBB2 130 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 BBOF1Q8ND07 529 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 OR52K1Q8NGK4 314 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 OR6N1Q8NGY5 312 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 OR13G1Q8NGZ3 307 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 ZNF488Q96MN9 340 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 TBL1YQ9BQ87 522 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 BCL7BQ9BQE9 202 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 WFDC1Q9HC57 220 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 FBXO6Q9NRD1 293 aaPredicted RBP2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 ZMAT5Q9UDW3 170 aaKnown RBP2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 ENOPH1Q9UHY7 261 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 ZNF229Q9UJW7 825 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 ST3GAL6Q9Y274 331 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 GOLT1BQ9Y3E0 138 aa2.27□□□□□ -2.05
SCAMP1-205ENST00000614488 CAMTA1Q9Y6Y1 1673 aa2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 SERTM2A0A1B0GWG4 89 aa2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 GOLGA8OA6NCC3 632 aa2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 ZNF716A6NP11 495 aa2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 GOLGA8NF8WBI6 632 aa2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 H0YIV9 168 aa2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 H0YJW9 148 aa2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 L7N2F9 121 aa2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 NEMFO60524 1076 aa2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 CIB2O75838 187 aa2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 FGF4P08620 206 aa2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 TPM1P09493 284 aa2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 UQCRFS1P1P0C7P4 283 aa2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 ANXA8P13928 327 aa2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 ANP32AP39687 249 aaKnown RBP2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 KIR3DL2P43630 455 aa2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 ETV1P50549 477 aa2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 ACTR3P61158 418 aa2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 TGFBIQ15582 683 aa2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 SNRNP35Q16560 246 aaKnown RBP2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 ANXA8L1Q5VT79 327 aa2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 METTL13Q8N6R0 699 aa2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 ZNF321PQ8N8H1 164 aa2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 PTX4Q96A99 478 aa2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 LZTS2Q9BRK4 669 aa2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 CLSTN2Q9H4D0 955 aa2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 METTL7AQ9H8H3 244 aa2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 KLHL28Q9NXS3 571 aa2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 PSME2Q9UL46 239 aa2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 CHTOPQ9Y3Y2 248 aaKnown RBP2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 TSSC4Q9Y5U2 329 aaPredicted RBP2.26□□□□□ -2.05
SCAMP1-205ENST00000614488 PHLPP2Q6ZVD8 1323 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 FAM240BA0A1B0GVZ2 78 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 OR6C74A6NCV1 312 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 VGLL3A8MV65 326 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 DNALI1O14645 258 aaPredicted RBP2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 CACNG3O60359 315 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 DNAJB6O75190 326 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 SERPIND1P05546 499 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 CD3GP09693 182 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 OR8U9P0C7N5 309 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 ZNF688P0C7X2 276 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 MCF2P10911 925 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 DCKP27707 260 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 CEACAM3P40198 252 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 CD151P48509 253 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 PLP1P60201 277 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 KRTAP12-3P60328 96 aa2.25□□□□□ -2.05
SCAMP1-205ENST00000614488 FLI1Q01543 452 aaPredicted RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms