RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 RNASE6Q93091 150 aaKnown RBP3□□□□□ -1.93
CKS1BP3-201ENST00000600888 PPCDCQ96CD2 204 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 ZBED6CLQ96FA7 236 aaPredicted RBP3□□□□□ -1.93
CKS1BP3-201ENST00000600888 PGM2Q96G03 612 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 PKNOX2Q96KN3 472 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 LURAP1Q96LR2 239 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 FAM111AQ96PZ2 611 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 STACQ99469 402 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 PKP2Q99959 881 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 RBM4BQ9BQ04 359 aaKnown RBP3□□□□□ -1.93
CKS1BP3-201ENST00000600888 EBPLQ9BY08 206 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 PARD6BQ9BYG5 372 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 UCK2Q9BZX2 261 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 FN3KQ9H479 309 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 EXO5Q9H790 373 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 ANKRA2Q9H9E1 313 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 PFDN4Q9NQP4 134 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 SDHAF3Q9NRP4 125 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 DDX18Q9NVP1 670 aaKnown RBP3□□□□□ -1.93
CKS1BP3-201ENST00000600888 FAM120CQ9NX05 1096 aaKnown RBP3□□□□□ -1.93
CKS1BP3-201ENST00000600888 KLRF1Q9NZS2 232 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 SLC17A7Q9P2U7 560 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 PRDM4Q9UKN5 801 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 L3MBTL1Q9Y468 752 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 OR10H1Q9Y4A9 318 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 POLR3HQ9Y535 204 aaPredicted RBP3□□□□□ -1.93
CKS1BP3-201ENST00000600888 PLCE1Q9P212 2302 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 MTORP42345 2549 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 ACANP16112 2415 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 SETD2Q9BYW2 2564 aaPredicted RBP3□□□□□ -1.93
CKS1BP3-201ENST00000600888 C2CD3Q4AC94 2353 aa3□□□□□ -1.93
CKS1BP3-201ENST00000600888 FLNAP21333 2647 aaKnown RBP2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 CADP27708 2225 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 A0A087WZY1 265 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 C15orf38-AP3S2A0A0A6YYH1 394 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 NKX2-6A6NCS4 301 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 SMIM23A6NLE4 172 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 CCL24O00175 119 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 SCAMP2O15127 329 aaKnown RBP2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 RGS16O15492 202 aaPredicted RBP2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 SPAG7O75391 227 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 CRLF1O75462 422 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 LRATO95237 230 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 SERPINE1P05121 402 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 GUSBP08236 651 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 KRT16P08779 473 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 LINC00032P0C843 101 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 PRPS1L1P21108 318 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 TBXA2RP21731 343 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 PRKACGP22612 351 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 DPP4P27487 766 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 GABRA3P34903 492 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 EVI2BP34910 448 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 OPRM1P35372 400 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 HPCAL1P37235 193 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 TRPC1P48995 793 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 LHX2P50458 406 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 CLDN8P56748 225 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 CLDN18P56856 261 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 RPL38P63173 70 aaKnown RBP2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 TLE4Q04727 773 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 EMX2Q04743 252 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 C17orf67Q0P5P2 114 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 ZNF273Q14593 569 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 TMEM44Q2T9K0 475 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 KRT71Q3SY84 523 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 ATP6AP1LQ52LC2 224 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 CES4AQ5XG92 561 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 OR2A2Q6IF42 318 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 ARSKQ6UWY0 536 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 TMEM107Q6UX40 140 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 SPNS3Q6ZMD2 512 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 MTERF4Q7Z6M4 381 aaKnown RBP2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 YRDCQ86U90 279 aaKnown RBP2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 GTSCR1Q86UQ5 136 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 IFNEQ86WN2 208 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 CCDC71Q8IV32 467 aaPredicted RBP2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 NUDCD3Q8IVD9 361 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 MISPQ8IVT2 679 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 NUP37Q8NFH4 326 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 OR2M3Q8NG83 312 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 OR8J2Q8NGG1 315 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 SFXN5Q8TD22 340 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 FAM222BQ8WU58 562 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 OR5P2Q8WZ92 322 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 JSRP1Q96MG2 331 aaPredicted RBP2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 MS4A4EQ96PG1 132 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 TSSK3Q96PN8 268 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 ZNF300Q96RE9 604 aaPredicted RBP2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 KATNB1Q9BVA0 655 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 SFXN3Q9BWM7 321 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 PIGUQ9H490 435 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 PTGES2Q9H7Z7 377 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 UBQLN4Q9NRR5 601 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 PAQR5Q9NXK6 330 aaPredicted RBP2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 CLCF1Q9UBD9 225 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 BAIAP2L1Q9UHR4 511 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 SLC6A5Q9Y345 797 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 AP4B1Q9Y6B7 739 aa2.99□□□□□ -1.93
CKS1BP3-201ENST00000600888 CHD3Q12873 2000 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms