RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 NAT2P11245 290 aa14.98□□□□□ -0.01
SHKBP1-203ENST00000594298 CFPP27918 469 aa14.98□□□□□ -0.01
SHKBP1-203ENST00000594298 LMO4P61968 165 aa14.98□□□□□ -0.01
SHKBP1-203ENST00000594298 CD300LDQ6UXZ3 194 aa14.98□□□□□ -0.01
SHKBP1-203ENST00000594298 SYT9Q86SS6 491 aa14.98□□□□□ -0.01
SHKBP1-203ENST00000594298 SLC30A7Q8NEW0 376 aa14.98□□□□□ -0.01
SHKBP1-203ENST00000594298 NABP1Q96AH0 204 aa14.98□□□□□ -0.01
SHKBP1-203ENST00000594298 SYT4Q9H2B2 425 aa14.98□□□□□ -0.01
SHKBP1-203ENST00000594298 BAIAP2Q9UQB8 552 aa14.98□□□□□ -0.01
SHKBP1-203ENST00000594298 TIMM10BQ9Y5J6 103 aa14.98□□□□□ -0.01
SHKBP1-203ENST00000594298 DEAF1O75398 565 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-203ENST00000594298 MMP7P09237 267 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-203ENST00000594298 LAP3P28838 519 aa14.97□□□□□ -0.01
SHKBP1-203ENST00000594298 APLNRP35414 380 aa14.97□□□□□ -0.01
SHKBP1-203ENST00000594298 CDKN2AP42771 156 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-203ENST00000594298 COMPP49747 757 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-203ENST00000594298 TBC1D28Q2M2D7 210 aa14.97□□□□□ -0.01
SHKBP1-203ENST00000594298 RGS7BPQ6MZT1 257 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-203ENST00000594298 LEG1Q6P5S2 330 aa14.97□□□□□ -0.01
SHKBP1-203ENST00000594298 GLB1L2Q8IW92 636 aa14.97□□□□□ -0.01
SHKBP1-203ENST00000594298 TEX29Q8N6K0 151 aa14.97□□□□□ -0.01
SHKBP1-203ENST00000594298 OR4K13Q8NH42 304 aa14.97□□□□□ -0.01
SHKBP1-203ENST00000594298 RERGLQ9H628 205 aa14.97□□□□□ -0.01
SHKBP1-203ENST00000594298 NARFLQ9H6Q4 476 aa14.97□□□□□ -0.01
SHKBP1-203ENST00000594298 EGLN3Q9H6Z9 239 aa14.97□□□□□ -0.01
SHKBP1-203ENST00000594298 ZNF556Q9HAH1 456 aa14.97□□□□□ -0.01
SHKBP1-203ENST00000594298 CDH20Q9HBT6 801 aa14.97□□□□□ -0.01
SHKBP1-203ENST00000594298 LPAR2Q9HBW0 351 aa14.97□□□□□ -0.01
SHKBP1-203ENST00000594298 POLE4Q9NR33 117 aa14.97□□□□□ -0.01
SHKBP1-203ENST00000594298 TBC1D23Q9NUY8 699 aa14.97□□□□□ -0.01
SHKBP1-203ENST00000594298 TREM2Q9NZC2 230 aa14.97□□□□□ -0.01
SHKBP1-203ENST00000594298 PDP1Q9P0J1 537 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-203ENST00000594298 GPR160Q9UJ42 338 aa14.97□□□□□ -0.01
SHKBP1-203ENST00000594298 IGLV3-9A0A075B6K5 115 aa14.96□□□□□ -0.01
SHKBP1-203ENST00000594298 TRAV20A0A0B4J274 112 aa14.96□□□□□ -0.01
SHKBP1-203ENST00000594298 C17orf100A8MU93 164 aa14.96□□□□□ -0.01
SHKBP1-203ENST00000594298 PPIHO43447 177 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-203ENST00000594298 ANXA8P13928 327 aa14.96□□□□□ -0.01
SHKBP1-203ENST00000594298 ANPEPP15144 967 aa14.96□□□□□ -0.01
SHKBP1-203ENST00000594298 ZNF250P15622 560 aa14.96□□□□□ -0.01
SHKBP1-203ENST00000594298 HIST1H1CP16403 213 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-203ENST00000594298 CTLA4P16410 223 aa14.96□□□□□ -0.01
SHKBP1-203ENST00000594298 ZNF32P17041 273 aa14.96□□□□□ -0.01
SHKBP1-203ENST00000594298 CLEC12AQ5QGZ9 265 aa14.96□□□□□ -0.01
SHKBP1-203ENST00000594298 SHQ1Q6PI26 577 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-203ENST00000594298 PTCHD4Q6ZW05 846 aa14.96□□□□□ -0.01
SHKBP1-203ENST00000594298 USP43Q70EL4 1123 aa14.96□□□□□ -0.01
SHKBP1-203ENST00000594298 ASRGL1Q7L266 308 aa14.96□□□□□ -0.01
SHKBP1-203ENST00000594298 ZNF418Q8TF45 676 aaPredicted RBP14.96□□□□□ -0.01
SHKBP1-203ENST00000594298 NRBF2Q96F24 287 aa14.96□□□□□ -0.01
SHKBP1-203ENST00000594298 NMNAT3Q96T66 252 aa14.96□□□□□ -0.01
SHKBP1-203ENST00000594298 FEVQ99581 238 aa14.96□□□□□ -0.01
SHKBP1-203ENST00000594298 TSSK6Q9BXA6 273 aa14.96□□□□□ -0.01
SHKBP1-203ENST00000594298 PLA2G12AQ9BZM1 189 aa14.96□□□□□ -0.01
SHKBP1-203ENST00000594298 NUAK2Q9H093 628 aa14.96□□□□□ -0.01
SHKBP1-203ENST00000594298 NKIRAS2Q9NYR9 191 aa14.96□□□□□ -0.01
SHKBP1-203ENST00000594298 COA3Q9Y2R0 106 aaPredicted RBP14.96□□□□□ -0.01
SHKBP1-203ENST00000594298 SNAP29O95721 258 aa14.95□□□□□ -0.02
SHKBP1-203ENST00000594298 PNPP00491 289 aa14.95□□□□□ -0.02
SHKBP1-203ENST00000594298 MAGEB1P43366 347 aa14.95□□□□□ -0.02
SHKBP1-203ENST00000594298 CENPAP49450 140 aa14.95□□□□□ -0.02
SHKBP1-203ENST00000594298 SELENOVP59797 346 aa14.95□□□□□ -0.02
SHKBP1-203ENST00000594298 LSM6P62312 80 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-203ENST00000594298 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.95□□□□□ -0.02
SHKBP1-203ENST00000594298 SCRN3Q0VDG4 424 aa14.95□□□□□ -0.02
SHKBP1-203ENST00000594298 NKPD1Q17RQ9 610 aa14.95□□□□□ -0.02
SHKBP1-203ENST00000594298 PCGF3Q3KNV8 242 aa14.95□□□□□ -0.02
SHKBP1-203ENST00000594298 PABPC1L2AQ5JQF8 200 aa14.95□□□□□ -0.02
SHKBP1-203ENST00000594298 UNQ6126/PRO20091Q6UXV3 157 aa14.95□□□□□ -0.02
SHKBP1-203ENST00000594298 PAQR4Q8N4S7 273 aaPredicted RBP14.95□□□□□ -0.02
SHKBP1-203ENST00000594298 OR2T33Q8NG76 320 aa14.95□□□□□ -0.02
SHKBP1-203ENST00000594298 OR52E2Q8NGJ4 325 aa14.95□□□□□ -0.02
SHKBP1-203ENST00000594298 SLCO4A1Q96BD0 722 aa14.95□□□□□ -0.02
SHKBP1-203ENST00000594298 SRA1Q9HD15 236 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-203ENST00000594298 HINT3Q9NQE9 182 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-203ENST00000594298 G6PC2Q9NQR9 355 aa14.95□□□□□ -0.02
SHKBP1-203ENST00000594298 ARMC1Q9NVT9 282 aa14.95□□□□□ -0.02
SHKBP1-203ENST00000594298 SLCO1C1Q9NYB5 712 aa14.95□□□□□ -0.02
SHKBP1-203ENST00000594298 TAAR3PQ9P1P4 343 aa14.95□□□□□ -0.02
SHKBP1-203ENST00000594298 EIF3KQ9UBQ5 218 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-203ENST00000594298 KLHL21Q9UJP4 597 aa14.95□□□□□ -0.02
SHKBP1-203ENST00000594298 B9D1Q9UPM9 204 aa14.95□□□□□ -0.02
SHKBP1-203ENST00000594298 AP4S1Q9Y587 144 aa14.95□□□□□ -0.02
SHKBP1-203ENST00000594298 BHLHE40O14503 412 aa14.94□□□□□ -0.02
SHKBP1-203ENST00000594298 FAM157BP0CG42 384 aa14.94□□□□□ -0.02
SHKBP1-203ENST00000594298 FCGR1AP12314 374 aa14.94□□□□□ -0.02
SHKBP1-203ENST00000594298 STOMP27105 288 aa14.94□□□□□ -0.02
SHKBP1-203ENST00000594298 RAD52P43351 418 aa14.94□□□□□ -0.02
SHKBP1-203ENST00000594298 GDI2P50395 445 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-203ENST00000594298 ERFP50548 548 aa14.94□□□□□ -0.02
SHKBP1-203ENST00000594298 KLF3P57682 345 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-203ENST00000594298 HILS1P60008 231 aa14.94□□□□□ -0.02
SHKBP1-203ENST00000594298 PSG4Q00888 419 aa14.94□□□□□ -0.02
SHKBP1-203ENST00000594298 SLC36A3Q495N2 470 aa14.94□□□□□ -0.02
SHKBP1-203ENST00000594298 SLC35F1Q5T1Q4 408 aa14.94□□□□□ -0.02
SHKBP1-203ENST00000594298 FAHD2BQ6P2I3 314 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-203ENST00000594298 C10orf67Q8IYJ2 551 aa14.94□□□□□ -0.02
SHKBP1-203ENST00000594298 LNX2Q8N448 690 aa14.94□□□□□ -0.02
SHKBP1-203ENST00000594298 SYNPRQ8TBG9 265 aa14.94□□□□□ -0.02
SHKBP1-203ENST00000594298 TEX47Q8TBZ9 253 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms