RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 TCRBV21S2A2A0A5A6 115 aa15.66■□□□□ 0.1
SCARF1-205ENST00000571272 EEF1E1-BLOC1S5C9J1V9 151 aa15.66■□□□□ 0.1
SCARF1-205ENST00000571272 CD74P04233 296 aa15.66■□□□□ 0.1
SCARF1-205ENST00000571272 CD1CP29017 333 aa15.66■□□□□ 0.1
SCARF1-205ENST00000571272 PPIAP62937 165 aaKnown RBP15.66■□□□□ 0.1
SCARF1-205ENST00000571272 ROM1Q03395 351 aa15.66■□□□□ 0.1
SCARF1-205ENST00000571272 SNTB1Q13884 538 aaKnown RBP15.66■□□□□ 0.1
SCARF1-205ENST00000571272 RNASE10Q5GAN6 216 aaKnown RBP15.66■□□□□ 0.1
SCARF1-205ENST00000571272 ACOT7LQ6ZUV0 252 aa15.66■□□□□ 0.1
SCARF1-205ENST00000571272 FJX1Q86VR8 437 aa15.66■□□□□ 0.1
SCARF1-205ENST00000571272 TMEM151BQ8IW70 566 aa15.66■□□□□ 0.1
SCARF1-205ENST00000571272 NUDT9Q9BW91 350 aa15.66■□□□□ 0.1
SCARF1-205ENST00000571272 SAV1Q9H4B6 383 aaPredicted RBP15.66■□□□□ 0.1
SCARF1-205ENST00000571272 HHLA2Q9UM44 414 aa15.66■□□□□ 0.1
SCARF1-205ENST00000571272 PCDHB10Q9UN67 800 aa15.66■□□□□ 0.1
SCARF1-205ENST00000571272 SLCO1B1Q9Y6L6 691 aa15.66■□□□□ 0.1
SCARF1-205ENST00000571272 TRIOO75962 3097 aa15.66■□□□□ 0.1
SCARF1-205ENST00000571272 WIPF3A6NGB9 483 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 SEMA4FO95754 770 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 RAB3AP20336 220 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 RABIFP47224 123 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 OR1D4P47884 311 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 IL13RA1P78552 427 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 TOMM20Q15388 145 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 PAN3Q58A45 887 aaKnown RBP15.65■□□□□ 0.1
SCARF1-205ENST00000571272 ZNF519Q8TB69 540 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 NUDCD2Q8WVJ2 157 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 WNT2BQ93097 391 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 SLC6A15Q9H2J7 730 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 ASF1BQ9NVP2 202 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 OR14I1A6ND48 311 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 TTLL8A6PVC2 850 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 DISC1C4P0D8 188 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 HLA-DOBP13765 273 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 RORAP35398 523 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 PRKXP51817 358 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 ZNF345Q14585 488 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 TMEM88Q6PEY1 159 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 MRGPRFQ96AM1 343 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 MICU1Q9BPX6 476 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 SLCO5A1Q9H2Y9 848 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 SLC39A1Q9NY26 324 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 LRP4O75096 1905 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 GPR31O00270 319 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 THEGLP0DJG4 465 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 SLC25A4P12235 298 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 AKR1C4P17516 323 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 ZBTB25P24278 435 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 IL12BP29460 328 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 BDKRB2P30411 391 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 CASRP41180 1078 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 NR0B1P51843 470 aaKnown RBP15.65■□□□□ 0.1
SCARF1-205ENST00000571272 ZP2Q05996 745 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 SERTAD2Q14140 314 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 SGCBQ16585 318 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 LYG2Q86SG7 212 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 TRAPPC6BQ86SZ2 158 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 OR52N5Q8NH56 324 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.65■□□□□ 0.1
SCARF1-205ENST00000571272 GAREM1Q9H706 876 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 MBD2Q9UBB5 411 aa15.65■□□□□ 0.1
SCARF1-205ENST00000571272 OR2AT4A6NND4 320 aa15.64■□□□□ 0.09
SCARF1-205ENST00000571272 P2RY10O00398 339 aa15.64■□□□□ 0.09
SCARF1-205ENST00000571272 EIF1AYO14602 144 aaKnown RBP15.64■□□□□ 0.09
SCARF1-205ENST00000571272 LDLRAD4O15165 306 aa15.64■□□□□ 0.09
SCARF1-205ENST00000571272 FZD2Q14332 565 aa15.64■□□□□ 0.09
SCARF1-205ENST00000571272 LPCAT3Q6P1A2 487 aa15.64■□□□□ 0.09
SCARF1-205ENST00000571272 OR10Z1Q8NGY1 313 aa15.64■□□□□ 0.09
SCARF1-205ENST00000571272 SLC46A1Q96NT5 459 aa15.64■□□□□ 0.09
SCARF1-205ENST00000571272 ADAT1Q9BUB4 502 aaKnown RBP15.64■□□□□ 0.09
SCARF1-205ENST00000571272 TXNIPQ9H3M7 391 aa15.64■□□□□ 0.09
SCARF1-205ENST00000571272 MYOZ1Q9NP98 299 aaPredicted RBP15.64■□□□□ 0.09
SCARF1-205ENST00000571272 HPF1Q9NWY4 346 aa15.64■□□□□ 0.09
SCARF1-205ENST00000571272 HS3ST3A1Q9Y663 406 aa15.64■□□□□ 0.09
SCARF1-205ENST00000571272 BLACEA4D250 179 aa15.64■□□□□ 0.09
SCARF1-205ENST00000571272 GP1BBP13224 206 aa15.64■□□□□ 0.09
SCARF1-205ENST00000571272 SLC6A8P48029 635 aa15.64■□□□□ 0.09
SCARF1-205ENST00000571272 FMODQ06828 376 aa15.64■□□□□ 0.09
SCARF1-205ENST00000571272 OR7A5Q15622 319 aa15.64■□□□□ 0.09
SCARF1-205ENST00000571272 DCXRQ7Z4W1 244 aa15.64■□□□□ 0.09
SCARF1-205ENST00000571272 RTN4RL2Q86UN3 420 aa15.64■□□□□ 0.09
SCARF1-205ENST00000571272 SLC25A42Q86VD7 318 aa15.64■□□□□ 0.09
SCARF1-205ENST00000571272 PRSS58Q8IYP2 241 aa15.64■□□□□ 0.09
SCARF1-205ENST00000571272 ADAD2Q8NCV1 583 aaKnown RBP15.64■□□□□ 0.09
SCARF1-205ENST00000571272 THAP6Q8TBB0 222 aa15.64■□□□□ 0.09
SCARF1-205ENST00000571272 ADAMTS18Q8TE60 1221 aa15.64■□□□□ 0.09
SCARF1-205ENST00000571272 TCTN2Q96GX1 697 aa15.64■□□□□ 0.09
SCARF1-205ENST00000571272 TSNAXQ99598 290 aaKnown RBP15.64■□□□□ 0.09
SCARF1-205ENST00000571272 TBL1XR1Q9BZK7 514 aa15.64■□□□□ 0.09
SCARF1-205ENST00000571272 CENPMQ9NSP4 180 aa15.64■□□□□ 0.09
SCARF1-205ENST00000571272 GDF2Q9UK05 429 aaPredicted RBP15.64■□□□□ 0.09
SCARF1-205ENST00000571272 SPTY2D1-AS1A0A0U1RR47 76 aa15.63■□□□□ 0.09
SCARF1-205ENST00000571272 C13orf42A0A1B0GVH6 325 aa15.63■□□□□ 0.09
SCARF1-205ENST00000571272 C9orf170A2RU37 121 aa15.63■□□□□ 0.09
SCARF1-205ENST00000571272 SULT2B1O00204 365 aa15.63■□□□□ 0.09
SCARF1-205ENST00000571272 SOX1O00570 391 aaPredicted RBP15.63■□□□□ 0.09
SCARF1-205ENST00000571272 NDUFA2O43678 99 aa15.63■□□□□ 0.09
SCARF1-205ENST00000571272 IGHV4-34P06331 123 aa15.63■□□□□ 0.09
SCARF1-205ENST00000571272 IL11P20809 199 aa15.63■□□□□ 0.09
SCARF1-205ENST00000571272 CD96P40200 585 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms