RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 RETNQ9HD89 108 aa3.19□□□□□ -1.9
LINC00557-201ENST00000563184 ZDHHC4Q9NPG8 344 aa3.19□□□□□ -1.9
LINC00557-201ENST00000563184 FAM49BQ9NUQ9 324 aa3.19□□□□□ -1.9
LINC00557-201ENST00000563184 RAB20Q9NX57 234 aa3.19□□□□□ -1.9
LINC00557-201ENST00000563184 PTTG3PQ9NZH4 202 aa3.19□□□□□ -1.9
LINC00557-201ENST00000563184 DUX4Q9UBX2 424 aa3.19□□□□□ -1.9
LINC00557-201ENST00000563184 KIF26AQ9ULI4 1882 aaPredicted RBP3.19□□□□□ -1.9
LINC00557-201ENST00000563184 A0A075B6Q4 140 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 SPRR5A0A1B0GTR4 108 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 TMEM223A0PJW6 202 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 L7N2F9 121 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 RAD51BO15315 384 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 AQP8O94778 261 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 ARG1P05089 322 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 CD3GP09693 182 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 ATF6P18850 670 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 BCKDHBP21953 392 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 OR1E1P30953 314 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 PRRX1P54821 245 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 RGS8P57771 180 aaPredicted RBP3.18□□□□□ -1.9
LINC00557-201ENST00000563184 TRAM2Q15035 370 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 PGGHGQ32M88 737 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 ORMDL2Q53FV1 153 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 UBALD2Q8IYN6 164 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 PRSS58Q8IYP2 241 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 SYNPRQ8TBG9 265 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 NTAN1Q96AB6 310 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 MCUR1Q96AQ8 359 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 ECHDC3Q96DC8 303 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 SPIN2AQ99865 258 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 SPIN2BQ9BPZ2 258 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 ANKRD60Q9BZ19 345 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 WFDC1Q9HC57 220 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 SIRT7Q9NRC8 400 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 GCNT4Q9P109 453 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 CTSFQ9UBX1 484 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 TSSC4Q9Y5U2 329 aaPredicted RBP3.18□□□□□ -1.9
LINC00557-201ENST00000563184 TMEM14AQ9Y6G1 99 aa3.18□□□□□ -1.9
LINC00557-201ENST00000563184 INSRP06213 1382 aa3.17□□□□□ -1.9
LINC00557-201ENST00000563184 ANKRD12Q6UB98 2062 aa3.17□□□□□ -1.9
LINC00557-201ENST00000563184 TMEM150BA6NC51 233 aa3.17□□□□□ -1.9
LINC00557-201ENST00000563184 NCBP2LA6PVI3 153 aaKnown RBP3.17□□□□□ -1.9
LINC00557-201ENST00000563184 FLOT1O75955 427 aa3.17□□□□□ -1.9
LINC00557-201ENST00000563184 MYL2P10916 166 aa3.17□□□□□ -1.9
LINC00557-201ENST00000563184 WARSP23381 471 aaKnown RBP3.17□□□□□ -1.9
LINC00557-201ENST00000563184 GTF2E2P29084 291 aaKnown RBP3.17□□□□□ -1.9
LINC00557-201ENST00000563184 SSTR5P35346 364 aa3.17□□□□□ -1.9
LINC00557-201ENST00000563184 SYKP43405 635 aa3.17□□□□□ -1.9
LINC00557-201ENST00000563184 UBE2NP61088 152 aaKnown RBP3.17□□□□□ -1.9
LINC00557-201ENST00000563184 XKR4Q5GH76 650 aa3.17□□□□□ -1.9
LINC00557-201ENST00000563184 FAM78AQ5JUQ0 283 aa3.17□□□□□ -1.9
LINC00557-201ENST00000563184 FBXW9Q5XUX1 488 aa3.17□□□□□ -1.9
LINC00557-201ENST00000563184 METTL13Q8N6R0 699 aa3.17□□□□□ -1.9
LINC00557-201ENST00000563184 C11orf72Q8NBR9 251 aa3.17□□□□□ -1.9
LINC00557-201ENST00000563184 OR8U1Q8NH10 309 aa3.17□□□□□ -1.9
LINC00557-201ENST00000563184 OR5K2Q8NHB8 316 aa3.17□□□□□ -1.9
LINC00557-201ENST00000563184 FAM81AQ8TBF8 368 aa3.17□□□□□ -1.9
LINC00557-201ENST00000563184 PIFOQ8TCI5 191 aa3.17□□□□□ -1.9
LINC00557-201ENST00000563184 ESR2Q92731 530 aa3.17□□□□□ -1.9
LINC00557-201ENST00000563184 C8orf44Q96CB5 159 aa3.17□□□□□ -1.9
LINC00557-201ENST00000563184 RBMXL1Q96E39 390 aaKnown RBP3.17□□□□□ -1.9
LINC00557-201ENST00000563184 PRRC1Q96M27 445 aa3.17□□□□□ -1.9
LINC00557-201ENST00000563184 ZNF835Q9Y2P0 537 aa3.17□□□□□ -1.9
LINC00557-201ENST00000563184 RFNGQ9Y644 331 aa3.17□□□□□ -1.9
LINC00557-201ENST00000563184 GAKO14976 1311 aa3.17□□□□□ -1.9
LINC00557-201ENST00000563184 COL22A1Q8NFW1 1626 aaPredicted RBP3.16□□□□□ -1.9
LINC00557-201ENST00000563184 SGK1O00141 431 aa3.16□□□□□ -1.9
LINC00557-201ENST00000563184 BET1O15155 118 aa3.16□□□□□ -1.9
LINC00557-201ENST00000563184 RBFOX2O43251 390 aaKnown RBP eCLIP3.16□□□□□ -1.9
LINC00557-201ENST00000563184 HUS1O60921 280 aa3.16□□□□□ -1.9
LINC00557-201ENST00000563184 YIF1AO95070 293 aa3.16□□□□□ -1.9
LINC00557-201ENST00000563184 LINC00869P0C866 280 aa3.16□□□□□ -1.9
LINC00557-201ENST00000563184 KIR3DL2P43630 455 aa3.16□□□□□ -1.9
LINC00557-201ENST00000563184 MRPL19P49406 292 aaKnown RBP3.16□□□□□ -1.9
LINC00557-201ENST00000563184 PPP1CBP62140 327 aa3.16□□□□□ -1.9
LINC00557-201ENST00000563184 QPRTQ15274 297 aa3.16□□□□□ -1.9
LINC00557-201ENST00000563184 NPSR1Q6W5P4 371 aa3.16□□□□□ -1.9
LINC00557-201ENST00000563184 BZW1Q7L1Q6 419 aaKnown RBP3.16□□□□□ -1.9
LINC00557-201ENST00000563184 CENPQQ7L2Z9 268 aaPredicted RBP3.16□□□□□ -1.9
LINC00557-201ENST00000563184 CBLN2Q8IUK8 224 aa3.16□□□□□ -1.9
LINC00557-201ENST00000563184 ZNF709Q8N972 641 aa3.16□□□□□ -1.9
LINC00557-201ENST00000563184 CCDC148Q8NFR7 591 aa3.16□□□□□ -1.9
LINC00557-201ENST00000563184 COQ8AQ8NI60 647 aa3.16□□□□□ -1.9
LINC00557-201ENST00000563184 LRRC29Q8WV35 223 aa3.16□□□□□ -1.9
LINC00557-201ENST00000563184 TMEM230Q96A57 120 aa3.16□□□□□ -1.9
LINC00557-201ENST00000563184 NARS2Q96I59 477 aaKnown RBP3.16□□□□□ -1.9
LINC00557-201ENST00000563184 ACTR3CQ9C0K3 210 aaPredicted RBP3.16□□□□□ -1.9
LINC00557-201ENST00000563184 LYARQ9NX58 379 aaKnown RBP3.16□□□□□ -1.9
LINC00557-201ENST00000563184 TUBGCP6Q96RT7 1819 aa3.15□□□□□ -1.91
LINC00557-201ENST00000563184 COLCA2A8K830 154 aa3.15□□□□□ -1.91
LINC00557-201ENST00000563184 H7C417 338 aa3.15□□□□□ -1.91
LINC00557-201ENST00000563184 RAD51CO43502 376 aa3.15□□□□□ -1.91
LINC00557-201ENST00000563184 RDH16O75452 317 aa3.15□□□□□ -1.91
LINC00557-201ENST00000563184 CD160O95971 181 aa3.15□□□□□ -1.91
LINC00557-201ENST00000563184 CTSLP07711 333 aa3.15□□□□□ -1.91
LINC00557-201ENST00000563184 ZNF286BP0CG31 522 aa3.15□□□□□ -1.91
LINC00557-201ENST00000563184 DTYMKP23919 212 aa3.15□□□□□ -1.91
LINC00557-201ENST00000563184 U2AF2P26368 475 aaKnown RBP eCLIP3.15□□□□□ -1.91
LINC00557-201ENST00000563184 STOMP27105 288 aa3.15□□□□□ -1.91
LINC00557-201ENST00000563184 UQCRFS1P47985 274 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms