RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 SCGB2B2Q4G0G5 96 aa4.75□□□□□ -1.65
PROM1-220ENST00000540805 PDZD11Q5EBL8 140 aa4.75□□□□□ -1.65
PROM1-220ENST00000540805 PWWP2BQ6NUJ5 590 aa4.75□□□□□ -1.65
PROM1-220ENST00000540805 TMEM71Q6P5X7 295 aa4.75□□□□□ -1.65
PROM1-220ENST00000540805 ULK3Q6PHR2 472 aa4.75□□□□□ -1.65
PROM1-220ENST00000540805 ZNF793Q6ZN11 406 aa4.75□□□□□ -1.65
PROM1-220ENST00000540805 MOB3CQ70IA8 216 aa4.75□□□□□ -1.65
PROM1-220ENST00000540805 GLB1L2Q8IW92 636 aa4.75□□□□□ -1.65
PROM1-220ENST00000540805 RNF113BQ8IZP6 322 aaKnown RBP4.75□□□□□ -1.65
PROM1-220ENST00000540805 SPAG16Q8N0X2 631 aa4.75□□□□□ -1.65
PROM1-220ENST00000540805 MUC20Q8N307 709 aaPredicted RBP4.75□□□□□ -1.65
PROM1-220ENST00000540805 PNLDC1Q8NA58 520 aaKnown RBP4.75□□□□□ -1.65
PROM1-220ENST00000540805 OR4C16Q8NGL9 310 aa4.75□□□□□ -1.65
PROM1-220ENST00000540805 THAP6Q8TBB0 222 aa4.75□□□□□ -1.65
PROM1-220ENST00000540805 SLC37A2Q8TED4 501 aa4.75□□□□□ -1.65
PROM1-220ENST00000540805 GTF3AQ92664 365 aaKnown RBP4.75□□□□□ -1.65
PROM1-220ENST00000540805 CNRIP1Q96F85 164 aaPredicted RBP4.75□□□□□ -1.65
PROM1-220ENST00000540805 MISP3Q96FF7 219 aa4.75□□□□□ -1.65
PROM1-220ENST00000540805 BORCS8Q96FH0 119 aa4.75□□□□□ -1.65
PROM1-220ENST00000540805 GFI1Q99684 422 aa4.75□□□□□ -1.65
PROM1-220ENST00000540805 PDCD1LG2Q9BQ51 273 aa4.75□□□□□ -1.65
PROM1-220ENST00000540805 DUSP23Q9BVJ7 150 aa4.75□□□□□ -1.65
PROM1-220ENST00000540805 ACTRT3Q9BYD9 372 aa4.75□□□□□ -1.65
PROM1-220ENST00000540805 CCDC86Q9H6F5 360 aaKnown RBP4.75□□□□□ -1.65
PROM1-220ENST00000540805 FKRPQ9H9S5 495 aa4.75□□□□□ -1.65
PROM1-220ENST00000540805 BARX1Q9HBU1 254 aaPredicted RBP4.75□□□□□ -1.65
PROM1-220ENST00000540805 C20orf141Q9NUB4 165 aa4.75□□□□□ -1.65
PROM1-220ENST00000540805 WSB2Q9NYS7 404 aaPredicted RBP4.75□□□□□ -1.65
PROM1-220ENST00000540805 ZNF223Q9UK11 482 aaPredicted RBP4.75□□□□□ -1.65
PROM1-220ENST00000540805 FBXL4Q9UKA2 621 aa4.75□□□□□ -1.65
PROM1-220ENST00000540805 PLEKHA6Q9Y2H5 1048 aa4.75□□□□□ -1.65
PROM1-220ENST00000540805 LRP4O75096 1905 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 ABCA7Q8IZY2 2146 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 SPENQ96T58 3664 aaKnown RBP4.74□□□□□ -1.65
PROM1-220ENST00000540805 C2CD4DB7Z1M9 353 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 EEF1E1-BLOC1S5C9J1V9 151 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 RRP8O43159 456 aaKnown RBP4.74□□□□□ -1.65
PROM1-220ENST00000540805 FCMRO60667 390 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 RBBP9O75884 186 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 YIF1AO95070 293 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 IFNA4P05014 189 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 CD1AP06126 327 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 SNRPCP09234 159 aaKnown RBP4.74□□□□□ -1.65
PROM1-220ENST00000540805 CSF1P09603 554 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 CALCBP10092 127 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 ZNF44P15621 663 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 LUMP51884 338 aaPredicted RBP4.74□□□□□ -1.65
PROM1-220ENST00000540805 HCCSP53701 268 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 GPR18Q14330 331 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 KCNAB1Q14722 419 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 CSRP2Q16527 193 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 UNQ9370/PRO34162Q6UXP9 181 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 TMEM184AQ6ZMB5 413 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 BEND4Q6ZU67 534 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 ZNF550Q7Z398 422 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 ZNF546Q86UE3 836 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 SLC35F2Q8IXU6 374 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 ARL14Q8N4G2 192 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 ARRDC1Q8N5I2 433 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 OR9K2Q8NGE7 335 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 OR1S2Q8NGQ3 325 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 OR1E3Q8WZA6 343 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 ZMYND19Q96E35 227 aaPredicted RBP4.74□□□□□ -1.65
PROM1-220ENST00000540805 CNN2Q99439 309 aaKnown RBP4.74□□□□□ -1.65
PROM1-220ENST00000540805 ELF4Q99607 663 aaPredicted RBP4.74□□□□□ -1.65
PROM1-220ENST00000540805 PRSS27Q9BQR3 290 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 NUDT22Q9BRQ3 303 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 G6PC3Q9BUM1 346 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 NXF5Q9H1B4 397 aaKnown RBP4.74□□□□□ -1.65
PROM1-220ENST00000540805 MEPEQ9NQ76 525 aaPredicted RBP4.74□□□□□ -1.65
PROM1-220ENST00000540805 MBNL1Q9NR56 388 aaKnown RBP4.74□□□□□ -1.65
PROM1-220ENST00000540805 MBD2Q9UBB5 411 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 OR5V1Q9UGF6 321 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 ATG4BQ9Y4P1 393 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 TRAV27A0A087WT01 109 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 C17orf113A0A1B0GUU1 675 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 OR14I1A6ND48 311 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 F5H5K5 113 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 ZIC2O95409 532 aaPredicted RBP4.74□□□□□ -1.65
PROM1-220ENST00000540805 GP1BAP07359 652 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 TACSTD2P09758 323 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 OR2T7P0C7T2 308 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 PGCP20142 388 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 PSMB10P40306 273 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 MAGEB1P43366 347 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 SPEM2Q0P670 501 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 DCAF12Q5T6F0 453 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 STPG1Q5TH74 334 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 ARHGAP11AQ6P4F7 1023 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 SSX9Q7RTT3 188 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 TMED4Q7Z7H5 227 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 TGIF2LXQ8IUE1 241 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 OR2T27Q8NH04 317 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 OR2L2Q8NH16 312 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 NUBPLQ8TB37 319 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 MIB2Q96AX9 1013 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 BPIFA2Q96DR5 249 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 ARSGQ96EG1 525 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 GUCD1Q96NT3 240 aa4.74□□□□□ -1.65
PROM1-220ENST00000540805 PIGQQ9BRB3 760 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms