RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 OR13C3Q8NGS6 347 aa11.58□□□□□ -0.56
SFSWAP-209ENST00000540469 EIF5A2Q9GZV4 153 aaKnown RBP11.58□□□□□ -0.56
SFSWAP-209ENST00000540469 SLC17A5Q9NRA2 495 aa11.58□□□□□ -0.56
SFSWAP-209ENST00000540469 EYSQ5T1H1 3165 aa11.58□□□□□ -0.56
SFSWAP-209ENST00000540469 MBTPS2O43462 519 aa11.58□□□□□ -0.56
SFSWAP-209ENST00000540469 PI3P19957 117 aa11.58□□□□□ -0.56
SFSWAP-209ENST00000540469 GLP1RP43220 463 aa11.58□□□□□ -0.56
SFSWAP-209ENST00000540469 ZNF616Q08AN1 781 aa11.58□□□□□ -0.56
SFSWAP-209ENST00000540469 C10orf91Q5T1B1 145 aa11.58□□□□□ -0.56
SFSWAP-209ENST00000540469 CRIPAKQ8N1N5 446 aa11.58□□□□□ -0.56
SFSWAP-209ENST00000540469 CSNK1A1LQ8N752 337 aa11.58□□□□□ -0.56
SFSWAP-209ENST00000540469 RRNAD1Q96FB5 475 aaKnown RBP11.58□□□□□ -0.56
SFSWAP-209ENST00000540469 NECAB3Q96P71 396 aaPredicted RBP11.58□□□□□ -0.56
SFSWAP-209ENST00000540469 TAF9BQ9HBM6 251 aa11.58□□□□□ -0.56
SFSWAP-209ENST00000540469 MSGN1A6NI15 193 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 ADAP1O75689 374 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 ABHD16AO95870 558 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 MELTFP08582 738 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 ZNF735P0CB33 412 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 ALOX5APP20292 161 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 ADH6P28332 368 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 PPICP45877 212 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 ID4P47928 161 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 ZNF425Q6IV72 752 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 Q6ZRG5 221 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 FAM24BQ8N5W8 94 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 OR51A2Q8NGJ7 313 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 ZNF563Q8TA94 476 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 RPS4Y2Q8TD47 263 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 MCHR2Q969V1 340 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 MOGAT1Q96PD6 335 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 CDC6Q99741 560 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 SMIM3Q9BZL3 60 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 CLN5O75503 358 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 TSPAN15O95858 294 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 S100A2P29034 98 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 LPAR6P43657 344 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 NAAAQ02083 359 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 ZNF77Q15935 545 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 DHRS11Q6UWP2 260 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 GALNTL5Q7Z4T8 443 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 SFTPA1Q8IWL2 248 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 RCBTB1Q8NDN9 531 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 TMEM52Q8NDY8 209 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 RNF166Q96A37 237 aaPredicted RBP11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 S100PBPQ96BU1 408 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 DOCK9Q9BZ29 2069 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 A0A087WV62 115 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 A0A1B0GV50 99 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 DUS4LO95620 317 aaKnown RBP11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 PDGFRLQ15198 375 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 ZNF124Q15973 351 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 Q3ZCU0 254 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 AWAT1Q58HT5 328 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 OR2B11Q5JQS5 317 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 ANKRD33Q7Z3H0 272 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 CCDC3Q9BQI4 270 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 EDEM2Q9BV94 578 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 Q9N2J8 555 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 MYOZ1Q9NP98 299 aaPredicted RBP11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 MRPS2Q9Y399 296 aaKnown RBP11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 INSL6Q9Y581 213 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 KPTNQ9Y664 436 aa11.57□□□□□ -0.56
SFSWAP-209ENST00000540469 C5orf42Q9H799 3197 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 VCANP13611 3396 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 CD63P08962 238 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 S1PR1P21453 382 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 ARRB1P49407 418 aaPredicted RBP11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 EGR3Q06889 387 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 PRICKLE4Q2TBC4 344 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 FHL5Q5TD97 284 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 RPL7L1Q6DKI1 246 aaKnown RBP11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 TMEM100Q9NV29 134 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 LRIT1Q9P2V4 623 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 MRPS18BQ9Y676 258 aaKnown RBP11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 PMS2P1A4D2B8 440 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 RHPN2P1A8MT19 583 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 F8VVB4 439 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 F8VWA3 439 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 ARG1P05089 322 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 HOXB5P09067 269 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 RCC1P18754 421 aaPredicted RBP11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 ITGA3P26006 1051 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 NPY4RP50391 375 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 RIDAP52758 137 aaKnown RBP11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 SLC25A1P53007 311 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 FCRL6Q6DN72 434 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 AWAT2Q6E213 333 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 HEATR5AQ86XA9 2040 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 ZDHHC22Q8N966 263 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 SLC25A36Q96CQ1 311 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 SPACA7Q96KW9 195 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 NUDT9Q9BW91 350 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 SLC17A9Q9BYT1 436 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 SPACA1Q9HBV2 294 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 STARD5Q9NSY2 213 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 OR5AC2Q9NZP5 309 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 SZT2Q5T011 3432 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 TICRRQ7Z2Z1 1910 aa11.56□□□□□ -0.56
SFSWAP-209ENST00000540469 PHYHO14832 338 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms