RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 SLC12A2P55011 1212 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 DLX1P56177 255 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 BLCAPP62952 87 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 TRA2BP62995 288 aaKnown RBP3.08□□□□□ -1.92
YBX3-205ENST00000536107 MYL5Q02045 173 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 C1DQ13901 141 aaKnown RBP3.08□□□□□ -1.92
YBX3-205ENST00000536107 SELPLGQ14242 412 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 ZNF404Q494X3 552 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 KLHL26Q53HC5 615 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 FAM201AQ5SY85 155 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 ARMC3Q5W041 872 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 C11orf63Q6NUN7 778 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 CDC73Q6P1J9 531 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 UNQ6126/PRO20091Q6UXV3 157 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 DCDC5Q6ZRR9 648 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 BTN2A1Q7KYR7 527 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 PATL1Q86TB9 770 aaKnown RBP3.08□□□□□ -1.92
YBX3-205ENST00000536107 MIER2Q8N344 545 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 OR2L13Q8N349 312 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 METTL4Q8N3J2 472 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 CDRT4Q8N9R6 151 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 L3MBTL4Q8NA19 623 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 ATG16L2Q8NAA4 619 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 C19orf18Q8NEA5 215 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 OR52H1Q8NGJ2 320 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 DCAKDQ8WVC6 231 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 ANKRD49Q8WVL7 239 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 TSEN15Q8WW01 171 aaKnown RBP3.08□□□□□ -1.92
YBX3-205ENST00000536107 ST8SIA4Q92187 359 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 ST6GALNAC6Q969X2 333 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 ELP4Q96EB1 424 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 OR2V2Q96R30 315 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 PITX2Q99697 317 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 DPCDQ9BVM2 203 aaPredicted RBP3.08□□□□□ -1.92
YBX3-205ENST00000536107 TAPBPLQ9BX59 468 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 SHCBP1LQ9BZQ2 653 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 RETNQ9HD89 108 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 B3GAT2Q9NPZ5 323 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 ABCB10Q9NRK6 738 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.08□□□□□ -1.92
YBX3-205ENST00000536107 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.08□□□□□ -1.92
YBX3-205ENST00000536107 RNF14Q9UBS8 474 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.08□□□□□ -1.92
YBX3-205ENST00000536107 NFU1Q9UMS0 254 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 RNF11Q9Y3C5 154 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 KPTNQ9Y664 436 aa3.08□□□□□ -1.92
YBX3-205ENST00000536107 TMED7-TICAM2A0A0A6YYA0 188 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 IQCMA0A1B0GVH7 501 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 TCRBV7S3A2A0A539 114 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 C16orf90A8MZG2 172 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 H3BUI4 141 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 CCL24O00175 119 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 ADAM20O43506 726 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 VAMP5O95183 116 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 ECDO95905 644 aaPredicted RBP3.07□□□□□ -1.92
YBX3-205ENST00000536107 IGHV4-30-4P0DP06 118 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 PRB4P10163 310 aaPredicted RBP3.07□□□□□ -1.92
YBX3-205ENST00000536107 GP9P14770 177 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 ZNF43P17038 809 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 APLNRP35414 380 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 POU3F4P49335 361 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 RGS6P49758 472 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 RAB13P51153 203 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 TAS2R39P59534 338 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 CDK16Q00536 496 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 ACSM1Q08AH1 577 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 HSPB3Q12988 150 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 OR4D1Q15615 310 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 KCNJ8Q15842 424 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 DUSP5Q16690 384 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 HAGHQ16775 308 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 CDKL4Q5MAI5 379 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 LCE3AQ5TA76 89 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 NCR3LG1Q68D85 454 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 TMEM53Q6P2H8 277 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 CEMP1Q6PRD7 247 aaPredicted RBP3.07□□□□□ -1.92
YBX3-205ENST00000536107 C10orf99Q6UWK7 81 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 ZNF841Q6ZN19 808 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 OR2W3Q7Z3T1 314 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 GRINAQ7Z429 371 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 ZER1Q7Z7L7 766 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 IGFN1Q86VF2 1251 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 SNX32Q86XE0 403 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 EPHX4Q8IUS5 362 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 ZNF584Q8IVC4 421 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 KLHL7Q8IXQ5 586 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 C1orf87Q8N0U7 546 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 KDM8Q8N371 416 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 C1orf52Q8N6N3 182 aaKnown RBP3.07□□□□□ -1.92
YBX3-205ENST00000536107 SLC25A40Q8TBP6 338 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 KLF14Q8TD94 323 aaPredicted RBP3.07□□□□□ -1.92
YBX3-205ENST00000536107 C17orf50Q8WW18 174 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 C1orf54Q8WWF1 131 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 CAPSLQ8WWF8 208 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 RNF183Q96D59 192 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 CCDC42Q96M95 316 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 CDRT15Q96T59 188 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 P2RX4Q99571 388 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 CCDC106Q9BWC9 280 aa3.07□□□□□ -1.92
YBX3-205ENST00000536107 OR2J1Q9GZK6 312 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms