RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 OR4S1Q8NGB4 309 aa15.94■□□□□ 0.14
NUP54-205ENST00000507257 TMED6Q8WW62 240 aa15.94■□□□□ 0.14
NUP54-205ENST00000507257 S1PR5Q9H228 398 aa15.94■□□□□ 0.14
NUP54-205ENST00000507257 RHOFQ9HBH0 211 aa15.94■□□□□ 0.14
NUP54-205ENST00000507257 DNAJB11Q9UBS4 358 aa15.94■□□□□ 0.14
NUP54-205ENST00000507257 CEACAM18A8MTB9 384 aa15.93■□□□□ 0.14
NUP54-205ENST00000507257 EEF1E1-BLOC1S5C9J1V9 151 aa15.93■□□□□ 0.14
NUP54-205ENST00000507257 H3BSH0 61 aa15.93■□□□□ 0.14
NUP54-205ENST00000507257 CD5P06127 495 aa15.93■□□□□ 0.14
NUP54-205ENST00000507257 S100A9P06702 114 aaKnown RBP15.93■□□□□ 0.14
NUP54-205ENST00000507257 PTAFRP25105 342 aa15.93■□□□□ 0.14
NUP54-205ENST00000507257 SERPINF1P36955 418 aa15.93■□□□□ 0.14
NUP54-205ENST00000507257 PMELP40967 661 aa15.93■□□□□ 0.14
NUP54-205ENST00000507257 RPS27P42677 84 aaKnown RBP15.93■□□□□ 0.14
NUP54-205ENST00000507257 FUT7Q11130 342 aa15.93■□□□□ 0.14
NUP54-205ENST00000507257 FAM78AQ5JUQ0 283 aa15.93■□□□□ 0.14
NUP54-205ENST00000507257 ZNF776Q68DI1 518 aaPredicted RBP15.93■□□□□ 0.14
NUP54-205ENST00000507257 PRSS54Q6PEW0 395 aa15.93■□□□□ 0.14
NUP54-205ENST00000507257 RHOUQ7L0Q8 258 aa15.93■□□□□ 0.14
NUP54-205ENST00000507257 TRAPPC6BQ86SZ2 158 aa15.93■□□□□ 0.14
NUP54-205ENST00000507257 CD163Q86VB7 1156 aa15.93■□□□□ 0.14
NUP54-205ENST00000507257 TMEM200AQ86VY9 491 aa15.93■□□□□ 0.14
NUP54-205ENST00000507257 HOGA1Q86XE5 327 aa15.93■□□□□ 0.14
NUP54-205ENST00000507257 ZSCAN4Q8NAM6 433 aaPredicted RBP15.93■□□□□ 0.14
NUP54-205ENST00000507257 OR1E3Q8WZA6 343 aa15.93■□□□□ 0.14
NUP54-205ENST00000507257 ASB16Q96NS5 453 aa15.93■□□□□ 0.14
NUP54-205ENST00000507257 KXD1Q9BQD3 176 aa15.93■□□□□ 0.14
NUP54-205ENST00000507257 RAB18Q9NP72 206 aa15.93■□□□□ 0.14
NUP54-205ENST00000507257 UBQLN4Q9NRR5 601 aa15.93■□□□□ 0.14
NUP54-205ENST00000507257 CGGBP1Q9UFW8 167 aaPredicted RBP15.93■□□□□ 0.14
NUP54-205ENST00000507257 EDARQ9UNE0 448 aa15.93■□□□□ 0.14
NUP54-205ENST00000507257 A0A0J9YY10 115 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 C5orf51A6NDU8 294 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 ZNF705EA8MWA4 302 aaPredicted RBP15.92■□□□□ 0.14
NUP54-205ENST00000507257 C2orf74A8MZ97 194 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 XKRYO14609 159 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 FABP1P07148 127 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 NAT2P11245 290 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 OR7A5Q15622 319 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 ARHGEF39Q8N4T4 335 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 C2CD4CQ8TF44 421 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 WNT2BQ93097 391 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 FAM46BQ96A09 425 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 RRNAD1Q96FB5 475 aaKnown RBP15.92■□□□□ 0.14
NUP54-205ENST00000507257 ADAM19Q9H013 955 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 SEBOXQ9HB31 216 aaPredicted RBP15.92■□□□□ 0.14
NUP54-205ENST00000507257 OBP2AQ9NY56 170 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 VSX1Q9NZR4 365 aaPredicted RBP15.92■□□□□ 0.14
NUP54-205ENST00000507257 FBLN5Q9UBX5 448 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 DPP7Q9UHL4 492 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 IGLV1-36A0A0B4J1U3 117 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 PRSS37A4D1T9 235 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 WIPF3A6NGB9 483 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 HRKO00198 91 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 MFNGO00587 321 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 SMAD9O15198 467 aaKnown RBP15.92■□□□□ 0.14
NUP54-205ENST00000507257 F12P00748 615 aaPredicted RBP15.92■□□□□ 0.14
NUP54-205ENST00000507257 LIPCP11150 499 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 MUC1P15941 1255 aaPredicted RBP15.92■□□□□ 0.14
NUP54-205ENST00000507257 LSSP48449 732 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 BTG2P78543 158 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 MFGE8Q08431 387 aaPredicted RBP15.92■□□□□ 0.14
NUP54-205ENST00000507257 PSRC1Q6PGN9 363 aaPredicted RBP15.92■□□□□ 0.14
NUP54-205ENST00000507257 MAMDC2Q7Z304 686 aaPredicted RBP15.92■□□□□ 0.14
NUP54-205ENST00000507257 C16orf52Q8NHV5 167 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 TCEAL3Q969E4 200 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 KTI12Q96EK9 354 aaPredicted RBP15.92■□□□□ 0.14
NUP54-205ENST00000507257 OR5B2Q96R09 309 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 CRB3Q9BUF7 120 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 MRPL22Q9NWU5 206 aaKnown RBP15.92■□□□□ 0.14
NUP54-205ENST00000507257 ANAPC10Q9UM13 185 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 NOSIPQ9Y314 301 aaKnown RBP15.92■□□□□ 0.14
NUP54-205ENST00000507257 R4GMQ9 66 aa15.92■□□□□ 0.14
NUP54-205ENST00000507257 FITM1A5D6W6 292 aa15.91■□□□□ 0.14
NUP54-205ENST00000507257 OR2W5A6NFC9 320 aa15.91■□□□□ 0.14
NUP54-205ENST00000507257 C1orf196B1AJZ1 125 aa15.91■□□□□ 0.14
NUP54-205ENST00000507257 H0YIZ8 118 aa15.91■□□□□ 0.14
NUP54-205ENST00000507257 TGFBR3LH3BV60 316 aa15.91■□□□□ 0.14
NUP54-205ENST00000507257 TAAR5O14804 337 aa15.91■□□□□ 0.14
NUP54-205ENST00000507257 SCAMP1O15126 338 aa15.91■□□□□ 0.14
NUP54-205ENST00000507257 BGLAPP02818 100 aa15.91■□□□□ 0.14
NUP54-205ENST00000507257 VAMP1P23763 118 aa15.91■□□□□ 0.14
NUP54-205ENST00000507257 ABCD3P28288 659 aa15.91■□□□□ 0.14
NUP54-205ENST00000507257 DNASE1L1P49184 302 aa15.91■□□□□ 0.14
NUP54-205ENST00000507257 NOGQ13253 232 aa15.91■□□□□ 0.14
NUP54-205ENST00000507257 HMGN3Q15651 99 aa15.91■□□□□ 0.14
NUP54-205ENST00000507257 TMEM128Q5BJH2 165 aa15.91■□□□□ 0.14
NUP54-205ENST00000507257 ZNF704Q6ZNC4 412 aaPredicted RBP15.91■□□□□ 0.14
NUP54-205ENST00000507257 KCTD9Q7L273 389 aa15.91■□□□□ 0.14
NUP54-205ENST00000507257 ADAD2Q8NCV1 583 aaKnown RBP15.91■□□□□ 0.14
NUP54-205ENST00000507257 OR51A2Q8NGJ7 313 aa15.91■□□□□ 0.14
NUP54-205ENST00000507257 OR10G6Q8NH81 332 aa15.91■□□□□ 0.14
NUP54-205ENST00000507257 ZNF519Q8TB69 540 aa15.91■□□□□ 0.14
NUP54-205ENST00000507257 ADAMTS18Q8TE60 1221 aa15.91■□□□□ 0.14
NUP54-205ENST00000507257 TAAR8Q969N4 342 aa15.91■□□□□ 0.14
NUP54-205ENST00000507257 TUBA4BQ9H853 241 aa15.91■□□□□ 0.14
NUP54-205ENST00000507257 MRPS33Q9Y291 106 aaKnown RBP15.91■□□□□ 0.14
NUP54-205ENST00000507257 LINC00587B1AMM8 73 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 RNASEK-C17orf49H0YIS7 233 aa15.9■□□□□ 0.14
NUP54-205ENST00000507257 ZNF264O43296 627 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms