RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 NTN3O00634 580 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 INSIG1O15503 277 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 GATCO43716 136 aaKnown RBP2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 CRLF1O75462 422 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 DUS4LO95620 317 aaKnown RBP2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 AIFM1O95831 613 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 TIMP1P01033 207 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 ORM1P02763 201 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 EIF4EP06730 217 aaKnown RBP2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 SERPINA6P08185 405 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 HOXC4P09017 264 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 HSPD1P10809 573 aaKnown RBP2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 CDK4P11802 303 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 IGFBP3P17936 291 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 GABRG2P18507 467 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 F8A1P23610 371 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 CMA1P23946 247 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 MAS1LP35410 378 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 COILP38432 576 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 VDAC2P45880 294 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 HILS1P60008 231 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 B2MP61769 119 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 SEMG2Q02383 582 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 DPTQ07507 201 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 ASAH1Q13510 395 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 ATP6AP1Q15904 470 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 TTMPQ5BVD1 217 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 OR10J3Q5JRS4 329 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 FAM27D1Q5T7N8 215 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 OGFRL1Q5TC84 451 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 HBMQ6B0K9 141 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 CRIP3Q6Q6R5 217 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 TMEM135Q86UB9 458 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 THOC6Q86W42 341 aaKnown RBP2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 ZFAND4Q86XD8 727 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 C10orf107Q8IVU9 208 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 SLC30A8Q8IWU4 369 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 FBXO16Q8IX29 292 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 C9orf40Q8IXQ3 194 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 RDH10Q8IZV5 341 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 CYP4Z2PQ8N1L4 340 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 CA13Q8N1Q1 262 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 Q8N402 240 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 ARRDC1Q8N5I2 433 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 C19orf18Q8NEA5 215 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 OR2L5Q8NG80 312 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 OR4F15Q8NGB8 312 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 OR10R2Q8NGX6 335 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 OR2L2Q8NH16 312 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 OR6X1Q8NH79 312 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 OR9G1Q8NH87 305 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 CCDC26Q8TAB7 109 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 SSC4DQ8WTU2 575 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 RNF133Q8WVZ7 376 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 FRAT1Q92837 279 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 PPWD1Q96BP3 646 aaKnown RBP2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 S100PBPQ96BU1 408 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 ZNF524Q96C55 264 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 CCDC42Q96M95 316 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 P2RX4Q99571 388 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 GABRG3Q99928 467 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 AGMATQ9BSE5 352 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 CCDC28BQ9BUN5 200 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 NUDT9Q9BW91 350 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 OCR1Q9BZK8 76 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 DERL2Q9GZP9 239 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 UPF3AQ9H1J1 476 aaKnown RBP2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 ASB8Q9H765 288 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 RDH14Q9HBH5 336 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 ACOT13Q9NPJ3 140 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 MRPL40Q9NQ50 206 aaKnown RBP2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 MIEF1Q9NQG6 463 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 FBXO8Q9NRD0 319 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 IMPAD1Q9NX62 359 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 NDE1Q9NXR1 346 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 TAS2R9Q9NYW1 312 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 Q9UF83 564 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 TRMT112Q9UI30 125 aaKnown RBP2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 ZNF107Q9UII5 783 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 CLEC4EQ9ULY5 219 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 TBL2Q9Y4P3 447 aaKnown RBP2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 STYXL1Q9Y6J8 313 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 TTC21AQ8NDW8 1320 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 RAD50Q92878 1312 aa2.93□□□□□ -1.94
HMGB1P22-201ENST00000505315 CKAP5Q14008 2032 aa2.92□□□□□ -1.94
HMGB1P22-201ENST00000505315 A0A0G2JLM5 398 aa2.92□□□□□ -1.94
HMGB1P22-201ENST00000505315 KIR2DS1A0A191URI9 304 aa2.92□□□□□ -1.94
HMGB1P22-201ENST00000505315 A8MXK9 166 aa2.92□□□□□ -1.94
HMGB1P22-201ENST00000505315 ERVV-2B6SEH9 535 aa2.92□□□□□ -1.94
HMGB1P22-201ENST00000505315 C9J4A7 227 aa2.92□□□□□ -1.94
HMGB1P22-201ENST00000505315 ANKRD65E5RJM6 399 aa2.92□□□□□ -1.94
HMGB1P22-201ENST00000505315 H0Y980 276 aa2.92□□□□□ -1.94
HMGB1P22-201ENST00000505315 M0R036 132 aa2.92□□□□□ -1.94
HMGB1P22-201ENST00000505315 SLC17A2O00624 439 aa2.92□□□□□ -1.94
HMGB1P22-201ENST00000505315 PHF1O43189 567 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P22-201ENST00000505315 MPZL2O60487 215 aa2.92□□□□□ -1.94
HMGB1P22-201ENST00000505315 LMX1BO60663 402 aa2.92□□□□□ -1.94
HMGB1P22-201ENST00000505315 GJB5O95377 273 aa2.92□□□□□ -1.94
HMGB1P22-201ENST00000505315 PPP1R3DO95685 299 aa2.92□□□□□ -1.94
HMGB1P22-201ENST00000505315 IFNA5P01569 189 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms