RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 F6UB75 175 aa3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 M0R3G1 203 aa3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 SRSF10O75494 262 aaKnown RBP3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 OTCP00480 354 aa3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 PLEKP08567 350 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 CSF3P09919 207 aa3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 ACSM4P0C7M7 580 aa3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 UBCP0CG48 685 aaKnown RBP3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 FOLR1P15328 257 aa3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 PRKACAP17612 351 aa3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 KLK2P20151 261 aa3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 MSR1P21757 451 aa3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 SERPINB5P36952 375 aa3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 SLC1A2P43004 574 aa3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 CCR8P51685 355 aa3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 CRISP1P54107 249 aa3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 DAOAP59103 153 aa3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 RAD51Q06609 339 aa3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 DNAJC3Q13217 504 aa3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 HERPUD1Q15011 391 aa3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 PGGHGQ32M88 737 aa3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 PAGE3Q5JUK9 113 aa3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 TGIF2LYQ8IUE0 185 aa3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 JAGN1Q8N5M9 183 aa3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 C8orf31Q8N9H6 132 aa3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 OR10R2Q8NGX6 335 aa3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 NDRG1Q92597 394 aaKnown RBP3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 JSRP1Q96MG2 331 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 UCK2Q9BZX2 261 aa3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 ACTR3CQ9C0K3 210 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 SHPKQ9UHJ6 478 aa3.77□□□□□ -1.81
HMGB1P3-201ENST00000502802 TRDMT1O14717 391 aaKnown RBP3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 FAM189A1O60320 539 aa3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 CLDN11O75508 207 aa3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 GIPP09681 153 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 HTR1EP28566 365 aa3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 CLDN18P56856 261 aa3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 STXBP1P61764 594 aaKnown RBP3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 SLC25A11Q02978 314 aaKnown RBP3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 TWF1Q12792 350 aa3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 CLINT1Q14677 625 aa3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 CCDC14Q49A88 953 aa3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 LRRC10Q5BKY1 277 aa3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 RSBN1Q5VWQ0 802 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 SPESP1Q6UW49 350 aa3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 HDDC2Q7Z4H3 204 aa3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 C11orf42Q8N5U0 333 aa3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 C20orf203Q8NBC4 194 aa3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 OR4F15Q8NGB8 312 aa3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 OR10G9Q8NGN4 311 aa3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 OR2G3Q8NGZ4 309 aa3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 KIAA1143Q96AT1 154 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 ZNF707Q96C28 371 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 ECHDC3Q96DC8 303 aa3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 CFAP53Q96M91 514 aa3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 OPALINQ96PE5 141 aa3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 OR5B12Q96R08 314 aa3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 P2RX4Q99571 388 aa3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 RASL11BQ9BPW5 248 aa3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 ZYG11BQ9C0D3 744 aa3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 TDRD3Q9H7E2 651 aaKnown RBP3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 UGT1A7Q9HAW7 530 aa3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 UGT1A8Q9HAW9 530 aa3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 NTN4Q9HB63 628 aa3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 RETNQ9HD89 108 aa3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 MYEF2Q9P2K5 600 aaKnown RBP3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 RHBDD3Q9Y3P4 386 aa3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 TNRC18O15417 2968 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P3-201ENST00000502802 MROH7-TTC4A0A0A0MT08 1334 aa3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 TRAV39A0A0B4J263 110 aa3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 H3BNH8 94 aa3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 HDAC3O15379 428 aa3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 EMC8O43402 210 aa3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 TNFSF13O75888 250 aa3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 CD160O95971 181 aa3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 HPNP05981 417 aa3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 SERPINE2P07093 398 aa3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 CALM1P0DP23 149 aa3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 CALM2P0DP24 149 aa3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 CALM3P0DP25 149 aa3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 TDGF1P13385 188 aa3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 MGMTP16455 207 aa3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 SRMP19623 302 aa3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 BCAP31P51572 246 aa3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 TDGF1P3P51864 188 aa3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 FGF8P55075 233 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 RPS21P63220 83 aaKnown RBP3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 TRAM2Q15035 370 aa3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 ZNF239Q16600 458 aaKnown RBP3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 SPINK14Q6IE38 97 aa3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 C6orf89Q6UWU4 347 aa3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 IL34Q6ZMJ4 242 aa3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 KRTAP17-1Q9BYP8 105 aa3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 RPF2Q9H7B2 306 aaKnown RBP3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 EML4Q9HC35 981 aaKnown RBP3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 ADAMTSL1Q8N6G6 1762 aa3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 DDX60Q8IY21 1712 aaKnown RBP3.75□□□□□ -1.81
HMGB1P3-201ENST00000502802 MYH3P11055 1940 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 IGLV3-10A0A075B6K4 115 aa3.74□□□□□ -1.81
HMGB1P3-201ENST00000502802 GJE1A6NN92 205 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms