RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 CCDC157Q569K6 752 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 C9orf50Q5SZB4 431 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 LYPD6Q86Y78 171 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 SVBPQ8N300 66 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 JAGN1Q8N5M9 183 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 METTL27Q8N6F8 245 aaPredicted RBP11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 GVQW1Q8N7I0 195 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 OR4D6Q8NGJ1 314 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 AQP3Q92482 292 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 CMBLQ96DG6 245 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 ZC3H10Q96K80 434 aaKnown RBP11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 GABRG3Q99928 467 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 WBP1LQ9NX94 342 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 CEP290O15078 2479 aa11.65□□□□□ -0.54
PDZRN3-205ENST00000466780 FREM3P0C091 2139 aa11.65□□□□□ -0.54
PDZRN3-205ENST00000466780 OR2AT4A6NND4 320 aa11.65□□□□□ -0.54
PDZRN3-205ENST00000466780 FADS1O60427 444 aa11.65□□□□□ -0.54
PDZRN3-205ENST00000466780 IL33O95760 270 aa11.65□□□□□ -0.54
PDZRN3-205ENST00000466780 RNASE10Q5GAN6 216 aaKnown RBP11.65□□□□□ -0.54
PDZRN3-205ENST00000466780 OR52W1Q6IF63 320 aa11.65□□□□□ -0.54
PDZRN3-205ENST00000466780 NUP54Q7Z3B4 507 aa11.65□□□□□ -0.54
PDZRN3-205ENST00000466780 FJX1Q86VR8 437 aa11.65□□□□□ -0.54
PDZRN3-205ENST00000466780 ARMC10Q8N2F6 343 aa11.65□□□□□ -0.54
PDZRN3-205ENST00000466780 ZNF519Q8TB69 540 aa11.65□□□□□ -0.54
PDZRN3-205ENST00000466780 THAP6Q8TBB0 222 aa11.65□□□□□ -0.54
PDZRN3-205ENST00000466780 METTL21AQ8WXB1 218 aa11.65□□□□□ -0.54
PDZRN3-205ENST00000466780 NKD1Q969G9 470 aa11.65□□□□□ -0.54
PDZRN3-205ENST00000466780 PRRT1Q99946 306 aa11.65□□□□□ -0.54
PDZRN3-205ENST00000466780 NXF5Q9H1B4 397 aaKnown RBP11.65□□□□□ -0.54
PDZRN3-205ENST00000466780 SEMA6CQ9H3T2 930 aa11.65□□□□□ -0.54
PDZRN3-205ENST00000466780 ESRP2Q9H6T0 727 aaKnown RBP11.65□□□□□ -0.54
PDZRN3-205ENST00000466780 MLXQ9UH92 298 aa11.65□□□□□ -0.54
PDZRN3-205ENST00000466780 LHX6Q9UPM6 363 aa11.65□□□□□ -0.54
PDZRN3-205ENST00000466780 LRP4O75096 1905 aa11.65□□□□□ -0.54
PDZRN3-205ENST00000466780 ARPC4-TTLL3A0A0A6YYG9 625 aa11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 A0A0A6YYH2 397 aa11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 CPED1A4D0V7 1026 aa11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 A6NJ64 397 aa11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 CLDN4O14493 209 aa11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 SRSF10O75494 262 aaKnown RBP11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 HOXB2P14652 356 aa11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 HNRNPA2B1P22626 353 aaKnown RBP11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 PPICP45877 212 aa11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 AKR1D1P51857 326 aa11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 RIDAP52758 137 aaKnown RBP11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 ADAM8P78325 824 aa11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 IL13RA1P78552 427 aa11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 EIF2B1Q14232 305 aaKnown RBP11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 MEF2DQ14814 521 aa11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 OR7A5Q15622 319 aa11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 ZNF260Q3ZCT1 412 aa11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 C1orf100Q5SVJ3 147 aa11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 RAB12Q6IQ22 244 aa11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 HAGHLQ6PII5 290 aaPredicted RBP11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 MARCH3Q86UD3 253 aa11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 PARGQ86W56 976 aa11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 PAQR4Q8N4S7 273 aaPredicted RBP11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 FRMD1Q8N878 549 aa11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 ADAD2Q8NCV1 583 aaKnown RBP11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 PIK3IP1Q96FE7 263 aa11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 GDF2Q9UK05 429 aaPredicted RBP11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 TMEM184BQ9Y519 407 aaPredicted RBP11.65□□□□□ -0.55
PDZRN3-205ENST00000466780 EEF1E1-BLOC1S5C9J1V9 151 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 RAB27BO00194 218 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 OR6A2O95222 327 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 MPZL1O95297 269 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 PGAM2P15259 253 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 TNFRSF4P43489 277 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 RPL27P61353 136 aaKnown RBP11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 B2MP61769 119 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 ZNF117Q03924 483 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 PLEKHN1Q494U1 663 aaPredicted RBP11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 ZNF542PQ5EBM4 170 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 TMEM71Q6P5X7 295 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 OOSP2Q86WS3 158 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 C19orf47Q8N9M1 422 aaKnown RBP11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 INO80EQ8NBZ0 244 aaPredicted RBP11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 PAQR8Q8TEZ7 354 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 CASTOR1Q8WTX7 329 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 SLC25A36Q96CQ1 311 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 S1PR5Q9H228 398 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 ZNF768Q9H5H4 540 aaKnown RBP11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 FN3KRPQ9HA64 309 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 PRODH2Q9UF12 536 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 MKL2Q9ULH7 1088 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 EMC9Q9Y3B6 208 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 LOC390937A0A1W2PQ73 354 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 F8VVB4 439 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 F8VWA3 439 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 KLF8O95600 359 aaPredicted RBP11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 F12P00748 615 aaPredicted RBP11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 CD79AP11912 226 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 MPZP25189 248 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 DCDP81605 110 aaKnown RBP11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 C10orf91Q5T1B1 145 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 PHF19Q5T6S3 580 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 KCTD18Q6PI47 426 aaPredicted RBP11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 KCTD9Q7L273 389 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 TRAPPC6BQ86SZ2 158 aa11.64□□□□□ -0.55
PDZRN3-205ENST00000466780 PRR22Q8IZ63 422 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms