RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 C5orf49A4QMS7 147 aa10.21□□□□□ -0.77
VPS52-213ENST00000461743 PRODHO43272 600 aa10.21□□□□□ -0.77
VPS52-213ENST00000461743 GPRIN2O60269 458 aa10.21□□□□□ -0.77
VPS52-213ENST00000461743 IGHV4-39P01824 125 aa10.21□□□□□ -0.77
VPS52-213ENST00000461743 HLA-DQA2P01906 255 aa10.21□□□□□ -0.77
VPS52-213ENST00000461743 IGFBP1P08833 259 aaPredicted RBP10.21□□□□□ -0.77
VPS52-213ENST00000461743 ZNF250P15622 560 aa10.21□□□□□ -0.77
VPS52-213ENST00000461743 SPI1P17947 270 aa10.21□□□□□ -0.77
VPS52-213ENST00000461743 RGS6P49758 472 aa10.21□□□□□ -0.77
VPS52-213ENST00000461743 UCP2P55851 309 aa10.21□□□□□ -0.77
VPS52-213ENST00000461743 DSCR9P59020 149 aa10.21□□□□□ -0.77
VPS52-213ENST00000461743 SELENOVP59797 346 aa10.21□□□□□ -0.77
VPS52-213ENST00000461743 CDK5Q00535 292 aa10.21□□□□□ -0.77
VPS52-213ENST00000461743 ECH1Q13011 328 aa10.21□□□□□ -0.77
VPS52-213ENST00000461743 MST1LQ2TV78 715 aa10.21□□□□□ -0.77
VPS52-213ENST00000461743 KDM4DQ6B0I6 523 aa10.21□□□□□ -0.77
VPS52-213ENST00000461743 SLC18B1Q6NT16 456 aa10.21□□□□□ -0.77
VPS52-213ENST00000461743 PAQR4Q8N4S7 273 aaPredicted RBP10.21□□□□□ -0.77
VPS52-213ENST00000461743 CYB561A3Q8NBI2 242 aa10.21□□□□□ -0.77
VPS52-213ENST00000461743 WFDC11Q8NEX6 87 aa10.21□□□□□ -0.77
VPS52-213ENST00000461743 LRTOMTQ8WZ04 291 aa10.21□□□□□ -0.77
VPS52-213ENST00000461743 TMUB1Q9BVT8 246 aa10.21□□□□□ -0.77
VPS52-213ENST00000461743 FN3KQ9H479 309 aa10.21□□□□□ -0.77
VPS52-213ENST00000461743 SRA1Q9HD15 236 aaKnown RBP10.21□□□□□ -0.77
VPS52-213ENST00000461743 TBCCD1Q9NVR7 557 aa10.21□□□□□ -0.77
VPS52-213ENST00000461743 CGGBP1Q9UFW8 167 aaPredicted RBP10.21□□□□□ -0.77
VPS52-213ENST00000461743 CYB5R1Q9UHQ9 305 aa10.21□□□□□ -0.77
VPS52-213ENST00000461743 GPR160Q9UJ42 338 aa10.21□□□□□ -0.77
VPS52-213ENST00000461743 COMMD3-BMI1R4GMX3 469 aa10.21□□□□□ -0.77
VPS52-213ENST00000461743 NSD1Q96L73 2696 aaPredicted RBP10.21□□□□□ -0.78
VPS52-213ENST00000461743 M0R233 179 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 SURF4O15260 269 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 ABHD16AO95870 558 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 TFP02787 698 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 ZNF823P16415 610 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 POU1F1P28069 291 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 FMO3P31513 532 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 WNT5AP41221 380 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 MTORP42345 2549 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 DAPP51397 102 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 EFNA4P52798 201 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 NUDT6P53370 316 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 CRISP1P54107 249 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 KLF3P57682 345 aaPredicted RBP10.2□□□□□ -0.78
VPS52-213ENST00000461743 SLC34A1Q06495 639 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 GINS1Q14691 196 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 MOGQ16653 247 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 PCK2Q16822 640 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 TEX30Q5JUR7 227 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 ELFN2Q5R3F8 820 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 DNM1P46Q6ZS02 220 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 IQCF1Q8N6M8 205 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 OR2AJ1Q8NGZ0 328 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 OR1F12Q8NHA8 337 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 PYDC1Q8WXC3 89 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 PLEKHA8Q96JA3 519 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 FOXN4Q96NZ1 517 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 DOK1Q99704 481 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 RBM4BQ9BQ04 359 aaKnown RBP10.2□□□□□ -0.78
VPS52-213ENST00000461743 MRPL37Q9BZE1 423 aaKnown RBP10.2□□□□□ -0.78
VPS52-213ENST00000461743 RAB1BQ9H0U4 201 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 DYNLRB1Q9NP97 96 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 MRPL22Q9NWU5 206 aaKnown RBP10.2□□□□□ -0.78
VPS52-213ENST00000461743 SLCO1C1Q9NYB5 712 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 TLN2Q9Y4G6 2542 aa10.2□□□□□ -0.78
VPS52-213ENST00000461743 TMEM129A0AVI4 362 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 PRR23D1E9PI22 279 aaPredicted RBP10.19□□□□□ -0.78
VPS52-213ENST00000461743 H3BNX3 289 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 RER1O15258 196 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 GLCEO94923 617 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 MPZL1O95297 269 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 LCKP06239 509 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 FAM157BP0CG42 384 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 PRR23D2P0DMB1 279 aaPredicted RBP10.19□□□□□ -0.78
VPS52-213ENST00000461743 CCL2P13500 99 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 PRKACGP22612 351 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 CCNOP22674 350 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 IGFBP5P24593 272 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 PYCR1P32322 319 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 GGT2P36268 569 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 ENTPD1P49961 510 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 PPP2R2BQ00005 443 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 RCN1Q15293 331 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 MEP1BQ16820 701 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 CLEC12BQ2HXU8 276 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 ZNF718Q3SXZ3 478 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 CCDC92Q53HC0 331 aaPredicted RBP10.19□□□□□ -0.78
VPS52-213ENST00000461743 SLC35D3Q5M8T2 416 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 MBNL2Q5VZF2 373 aaKnown RBP10.19□□□□□ -0.78
VPS52-213ENST00000461743 RFPL4BQ6ZWI9 263 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 AMIGO2Q86SJ2 522 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 ZNF101Q8IZC7 436 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 OR9Q1Q8NGQ5 310 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 OR1J1Q8NGS3 322 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 SYNPRQ8TBG9 265 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 SNX33Q8WV41 574 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 NEU4Q8WWR8 484 aaPredicted RBP10.19□□□□□ -0.78
VPS52-213ENST00000461743 C4orf45Q96LM5 186 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 Q96MF0 132 aa10.19□□□□□ -0.78
VPS52-213ENST00000461743 CDADC1Q9BWV3 514 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms