RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 TBPL2Q6SJ96 375 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 C12orf54Q6X4T0 127 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 USP51Q70EK9 711 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 CCDC80Q76M96 950 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 NANOGNBQ7Z5D8 188 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 PATL1Q86TB9 770 aaKnown RBP3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 GLCCI1Q86VQ1 547 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 ZNF101Q8IZC7 436 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 RFLNBQ8N5W9 214 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 NOXO1Q8NFA2 376 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 OR51A7Q8NH64 312 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 ZNF519Q8TB69 540 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 SLC25A40Q8TBP6 338 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 C10orf82Q8WW14 230 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 ASB10Q8WXI3 467 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 C22orf15Q8WYQ4 148 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 CCL17Q92583 94 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 LRRC58Q96CX6 371 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 SGTBQ96EQ0 304 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 TPD52L3Q96J77 140 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 MPP4Q96JB8 637 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 ZNF583Q96ND8 569 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 DCLRE1CQ96SD1 692 aaKnown RBP3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 ZNF426Q9BUY5 554 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 MRI1Q9BV20 369 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 TMEM120AQ9BXJ8 343 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 PCDHAC1Q9H158 963 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 KCNN2Q9H2S1 579 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 DENND2DQ9H6A0 471 aaPredicted RBP3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 EVA1AQ9H8M9 152 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 CCNB1IP1Q9NPC3 277 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 HINT3Q9NQE9 182 aaKnown RBP3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 INIPQ9NRY2 104 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 DECR2Q9NUI1 292 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 DCAF16Q9NXF7 216 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 RHCGQ9UBD6 479 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 SLC23A1Q9UHI7 598 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 WIPI2Q9Y4P8 454 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 UGT2A1Q9Y4X1 527 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 SNX13Q9Y5W8 968 aa3.98□□□□□ -1.77
GTF3C3-208ENST00000455546 TRAV27A0A087WT01 109 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 IGHV1-69-2A0A0G2JMI3 117 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 LOC100996750A0A140TA64 210 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 A0A1W2PPL8 197 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 SLC22A23A1A5C7 686 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 H7C1C5 153 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 FXYD1O00168 92 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 SLC16A6O15403 523 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 SNAP29O95721 258 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 PTHP01270 115 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 IGHV1-46P01743 117 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 IGHV3-13P01766 116 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 SBK2P0C263 348 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 IFI30P13284 250 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 GCH1P30793 250 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 CRYBB2P43320 205 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 GDI2P50395 445 aaKnown RBP3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 ZNF81P51508 661 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 CTXN1P60606 82 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 LCN6P62502 163 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 LCN2P80188 198 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 CD47Q08722 323 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 KLF10Q13118 480 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 HFEQ30201 348 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 ZNF718Q3SXZ3 478 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 MMEL1Q495T6 779 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 LRRC23Q53EV4 343 aaPredicted RBP3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 CYBRD1Q53TN4 286 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 ALG10Q5BKT4 473 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 INTS11Q5TA45 600 aaKnown RBP3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 REP15Q6BDI9 236 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 ACSM5Q6NUN0 579 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 ZNF774Q6NX45 483 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 SHQ1Q6PI26 577 aaKnown RBP3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 SLC25A47Q6Q0C1 308 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 UGT2A3Q6UWM9 527 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 LCNL1Q6ZST4 164 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 VTCN1Q7Z7D3 282 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 PEG10Q86TG7 708 aaKnown RBP3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 CALHM3Q86XJ0 350 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 SLC30A8Q8IWU4 369 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 LRRC75AQ8NAA5 344 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 OR1J2Q8NGS2 313 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 OR51F2Q8NH61 342 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 KLF14Q8TD94 323 aaPredicted RBP3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 TMEM239Q8WW34 195 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 GEMIN6Q8WXD5 167 aaKnown RBP3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 LRTOMTQ8WZ04 291 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 TAF15Q92804 592 aaKnown RBP eCLIP3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 NABP1Q96AH0 204 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 NMD3Q96D46 503 aaKnown RBP3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 BPIFA2Q96DR5 249 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 MARS2Q96GW9 593 aaKnown RBP3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 POM121L2Q96KW2 1035 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 SEPHS2Q99611 448 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 ZNF416Q9BWM5 594 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 C1QTNF5Q9BXJ0 243 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 KRTAP4-6Q9BYQ5 205 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 PLA2G12AQ9BZM1 189 aa3.97□□□□□ -1.77
GTF3C3-208ENST00000455546 BCL2L14Q9BZR8 327 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms