RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 TMEM225Q6GV28 225 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 KLHL24Q6TFL4 600 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 TMPPEQ6ZT21 453 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 SIAH3Q8IW03 269 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 TMEM156Q8N614 296 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 DTX3Q8N9I9 347 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 OR1J4Q8NGS1 313 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 OR10AC1Q8NH08 325 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 FCAMRQ8WWV6 532 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 C11orf40Q8WZ69 217 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 AKAP1Q92667 903 aaKnown RBP eCLIP9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 FAM210AQ96ND0 272 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 TAAR9Q96RI9 348 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 NAA11Q9BSU3 229 aaPredicted RBP9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 C1orf198Q9H425 327 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 ZNF160Q9HCG1 818 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 G6PC2Q9NQR9 355 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 ING3Q9NXR8 418 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 EMC3Q9P0I2 261 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 NUFIP1Q9UHK0 495 aaKnown RBP9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 OR52A1Q9UKL2 312 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 GTF2A1LQ9UNN4 478 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 SLC22A13Q9Y226 551 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 RBMX2Q9Y388 322 aaKnown RBP9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 N6AMT1Q9Y5N5 214 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 A0A087WV48 116 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 A0A1W2PNR3 127 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 C7orf66A4D0T2 115 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 GJE1A6NN92 205 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 ZNF726A6NNF4 738 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 DNPH1O43598 174 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 CBR3O75828 277 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 MPZL1O95297 269 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 TCRBP04435 133 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 CELA2AP08217 269 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 FTH1P19P0C7X4 201 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 IGFBP3P17936 291 aaPredicted RBP9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 DNASE1L1P49184 302 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 AGFG1P52594 562 aaKnown RBP9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 CSNK2A1P68400 391 aaPredicted RBP9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 SSPNQ14714 243 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 POU4F3Q15319 338 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 TMEM176BQ3YBM2 270 aaPredicted RBP9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 BCL2L15Q5TBC7 163 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 SLC25A47Q6Q0C1 308 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 ESPNLQ6ZVH7 1005 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 NKAIN3Q8N8D7 197 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 OR51A4Q8NGJ6 313 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 OR2AJ1Q8NGZ0 328 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 ASB5Q8WWX0 329 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 FOXRED1Q96CU9 486 aaPredicted RBP9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 LIN37Q96GY3 246 aaPredicted RBP9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 FAM117AQ9C073 453 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 CYB5R1Q9UHQ9 305 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 DKKL1Q9UK85 242 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 TCFL5Q9UL49 500 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 PTPRBP23467 1997 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 IGKV1D-43A0A0B4J1Z2 117 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 TEX51A0A1B0GUA7 166 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 TMEM269A0A1B0GVZ9 245 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 LOC107986453A0A1B0GWG9 222 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 XRCC3O43542 346 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 GLSO94925 669 aaPredicted RBP9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 YES1P07947 543 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 CCL3P10147 92 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 PTH2RP49190 550 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 SRP9P49458 86 aaKnown RBP9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 CLDN12P56749 244 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 TAS2R20P59543 309 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 SNTB2Q13425 540 aaKnown RBP9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 TRIP6Q15654 476 aaKnown RBP9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 INPP5JQ15735 1006 aaPredicted RBP9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 HIST3H3Q16695 136 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 ODF4Q2M2E3 257 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 ELFN2Q5R3F8 820 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 OLFML2AQ68BL7 652 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 FAM166AQ6J272 317 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 ANKRD16Q6P6B7 361 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 DNM1P46Q6ZS02 220 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 BTN2A1Q7KYR7 527 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 PPP1R32Q7Z5V6 425 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 GLCCI1Q86VQ1 547 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 LIX1LQ8IVB5 337 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 LINC00346Q8IVM7 164 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 OR6M1Q8NGM8 313 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 OR13C3Q8NGS6 347 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 SLAMF6Q96DU3 332 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 SCMH1Q96GD3 660 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 OR2M2Q96R28 347 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 PIGQQ9BRB3 760 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 CACNG6Q9BXT2 260 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 TMEM185BQ9H7F4 350 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 DIABLOQ9NR28 239 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 POU2F3Q9UKI9 436 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 EMC9Q9Y3B6 208 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 FREM3P0C091 2139 aa9.32□□□□□ -0.92
POLR2J3-201ENST00000379340 LOC100289279A0A1B0GTE1 492 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 A0A1W2PPL8 197 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 FAM172BPA6NC97 362 aa9.31□□□□□ -0.92
POLR2J3-201ENST00000379340 ZNF878C9JN71 531 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms