RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 CD83Q01151 205 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 GPR176Q14439 515 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 FGFBP1Q14512 234 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 PLA1AQ53H76 456 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 BTN2A1Q7KYR7 527 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 ADGRE4PQ86SQ3 457 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 TMEM200AQ86VY9 491 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 SAMD12Q8N8I0 201 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 C9orf106Q8NAJ2 232 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 OR56B4Q8NH76 319 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 TRMT10AQ8TBZ6 339 aaKnown RBP9.23□□□□□ -0.93
COL5A1-202ENST00000371820 FAM222BQ8WU58 562 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 SNX33Q8WV41 574 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 ZBTB8AQ96BR9 441 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 SMIM19Q96E16 107 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 CNN2Q99439 309 aaKnown RBP9.23□□□□□ -0.93
COL5A1-202ENST00000371820 ZNF426Q9BUY5 554 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 OR51V1Q9H2C8 321 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 C12orf10Q9HB07 376 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 NRIP3Q9NQ35 241 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 EDARQ9UNE0 448 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 ZNF337Q9Y3M9 751 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 ZNF175Q9Y473 711 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 FREM3P0C091 2139 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 ANKHD1Q8IWZ3 2542 aaKnown RBP9.22□□□□□ -0.93
COL5A1-202ENST00000371820 OR2M5A3KFT3 312 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 TUBAL3A6NHL2 446 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 SLC22A20A6NK97 555 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 H3BML4 177 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 CDC42EP2O14613 210 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 PEX14O75381 377 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 RAF1P04049 648 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 UCHL1P09936 223 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 CALCBP10092 127 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 ANXA3P12429 323 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 DIO1P49895 249 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 ART1P52961 327 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 BLVRAP53004 296 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 SUMO3P55854 103 aaPredicted RBP9.22□□□□□ -0.93
COL5A1-202ENST00000371820 B3GALT5-AS1P59052 145 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 SNTB2Q13425 540 aaKnown RBP9.22□□□□□ -0.93
COL5A1-202ENST00000371820 DOC2BQ14184 412 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 P2RY14Q15391 338 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 SGCBQ16585 318 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 CDONQ4KMG0 1287 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 ALG10BQ5I7T1 473 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 UBE2NLQ5JXB2 153 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 PDSS1Q5T2R2 415 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 ARL9Q6T311 187 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 LRRN1Q6UXK5 716 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 SHFQ7M4L6 423 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 OR6V1Q8N148 313 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 ZFP41Q8N8Y5 198 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 OR4C3Q8NH37 302 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 LIPHQ8WWY8 451 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 ASB13Q8WXK3 278 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 GHSRQ92847 366 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 S100A16Q96FQ6 103 aaKnown RBP9.22□□□□□ -0.93
COL5A1-202ENST00000371820 DMRTB1Q96MA1 342 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 ERMAPQ96PL5 475 aaPredicted RBP9.22□□□□□ -0.93
COL5A1-202ENST00000371820 ISG20L2Q9H9L3 353 aaKnown RBP9.22□□□□□ -0.93
COL5A1-202ENST00000371820 ADGRL4Q9HBW9 690 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 TAS2R8Q9NYW2 309 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 IL20RAQ9UHF4 553 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 RASD1Q9Y272 281 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 VDAC3Q9Y277 283 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 ETV7Q9Y603 341 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 TMEM14AQ9Y6G1 99 aa9.22□□□□□ -0.93
COL5A1-202ENST00000371820 ITPR3Q14573 2671 aa9.21□□□□□ -0.93
COL5A1-202ENST00000371820 A0A087WUJ7 227 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 TRBV2A0A0J9YWF9 115 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 A0A1B0GWA3 101 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 MSTNO14793 375 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 SSX4O60224 188 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 NOS1APO75052 506 aaPredicted RBP9.21□□□□□ -0.94
COL5A1-202ENST00000371820 ZNF780AO75290 641 aaPredicted RBP9.21□□□□□ -0.94
COL5A1-202ENST00000371820 APOL3O95236 402 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 SLC2A10O95528 541 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 TCRBP04435 133 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 H2AFB2P0C5Z0 115 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 PYCR1P32322 319 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 FAUP35544 74 aaKnown RBP9.21□□□□□ -0.94
COL5A1-202ENST00000371820 MNDAP41218 407 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 EIF1P41567 113 aaKnown RBP9.21□□□□□ -0.94
COL5A1-202ENST00000371820 SLC25A1P53007 311 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 DLX5P56178 289 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 SLC3A1Q07837 685 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 CDK5R1Q15078 307 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 KRTAP21-3Q3LHN1 58 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 ZNF362Q5T0B9 420 aaPredicted RBP9.21□□□□□ -0.94
COL5A1-202ENST00000371820 POMZP3Q6PJE2 187 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 APOOLQ6UXV4 268 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 TMEM99Q8N816 258 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 GATSQ8NAP1 163 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 FAM71CQ8NEG0 241 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 OR4M1Q8NGD0 313 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 PHOSPHO1Q8TCT1 267 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 NSMAFQ92636 917 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 NRGNQ92686 78 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 INTS12Q96CB8 462 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms