RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 PTCHD4Q6ZW05 846 aa15.05■□□□□ -0
HDDC3-201ENST00000330334 PIGWQ7Z7B1 504 aa15.05■□□□□ -0
HDDC3-201ENST00000330334 CCL17Q92583 94 aa15.05■□□□□ -0
HDDC3-201ENST00000330334 PTP4A1Q93096 173 aa15.05■□□□□ -0
HDDC3-201ENST00000330334 MCUR1Q96AQ8 359 aa15.05■□□□□ -0
HDDC3-201ENST00000330334 HAVCR1Q96D42 359 aa15.05■□□□□ -0
HDDC3-201ENST00000330334 C19orf24Q9BVV8 132 aa15.05■□□□□ -0
HDDC3-201ENST00000330334 NUAK2Q9H093 628 aa15.05■□□□□ -0
HDDC3-201ENST00000330334 IL1RAPQ9NPH3 570 aa15.05■□□□□ -0
HDDC3-201ENST00000330334 NDE1Q9NXR1 346 aa15.05■□□□□ -0
HDDC3-201ENST00000330334 ASH2LQ9UBL3 628 aa15.05■□□□□ -0
HDDC3-201ENST00000330334 IL20RAQ9UHF4 553 aa15.05■□□□□ -0
HDDC3-201ENST00000330334 METRNQ9UJH8 293 aa15.05■□□□□ -0
HDDC3-201ENST00000330334 CACNG2Q9Y698 323 aa15.05■□□□□ -0
HDDC3-201ENST00000330334 SOCS2O14508 198 aa15.04■□□□□ -0
HDDC3-201ENST00000330334 TIMM8AO60220 97 aaPredicted RBP15.04■□□□□ -0
HDDC3-201ENST00000330334 GADD45GO95257 159 aa15.04■□□□□ -0
HDDC3-201ENST00000330334 IGHV2-5P01817 119 aa15.04■□□□□ -0
HDDC3-201ENST00000330334 FPR3P25089 353 aa15.04■□□□□ -0
HDDC3-201ENST00000330334 IFNGR2P38484 337 aa15.04■□□□□ -0
HDDC3-201ENST00000330334 RGS6P49758 472 aa15.04■□□□□ -0
HDDC3-201ENST00000330334 HIST1H3AP68431 136 aa15.04■□□□□ -0
HDDC3-201ENST00000330334 CCDC92Q53HC0 331 aaPredicted RBP15.04■□□□□ -0
HDDC3-201ENST00000330334 AVPI1Q5T686 147 aa15.04■□□□□ -0
HDDC3-201ENST00000330334 HIST2H3PS2Q5TEC6 136 aa15.04■□□□□ -0
HDDC3-201ENST00000330334 DNM1P34Q6PK57 102 aa15.04■□□□□ -0
HDDC3-201ENST00000330334 RINLQ6ZS11 566 aa15.04■□□□□ -0
HDDC3-201ENST00000330334 HIST2H3AQ71DI3 136 aa15.04■□□□□ -0
HDDC3-201ENST00000330334 OR1F12Q8NHA8 337 aa15.04■□□□□ -0
HDDC3-201ENST00000330334 NSMCE2Q96MF7 247 aa15.04■□□□□ -0
HDDC3-201ENST00000330334 CDRT15Q96T59 188 aa15.04■□□□□ -0
HDDC3-201ENST00000330334 LPAR2Q9HBW0 351 aa15.04■□□□□ -0
HDDC3-201ENST00000330334 MSL2Q9HCI7 577 aa15.04■□□□□ -0
HDDC3-201ENST00000330334 G6PC2Q9NQR9 355 aa15.04■□□□□ -0
HDDC3-201ENST00000330334 TAGLN3Q9UI15 199 aa15.04■□□□□ -0
HDDC3-201ENST00000330334 PURGQ9UJV8 347 aaKnown RBP15.04■□□□□ -0
HDDC3-201ENST00000330334 ARL2BPQ9Y2Y0 163 aa15.04■□□□□ -0
HDDC3-201ENST00000330334 STARD10Q9Y365 291 aa15.04■□□□□ -0
HDDC3-201ENST00000330334 IDH3BO43837 385 aa15.03■□□□□ -0
HDDC3-201ENST00000330334 MPZL1O95297 269 aa15.03■□□□□ -0
HDDC3-201ENST00000330334 PNPP00491 289 aa15.03■□□□□ -0
HDDC3-201ENST00000330334 RAC2P15153 192 aa15.03■□□□□ -0
HDDC3-201ENST00000330334 SLC6A6P31641 620 aa15.03■□□□□ -0
HDDC3-201ENST00000330334 PEG10Q86TG7 708 aaKnown RBP15.03■□□□□ -0
HDDC3-201ENST00000330334 GJC3Q8NFK1 279 aa15.03■□□□□ -0
HDDC3-201ENST00000330334 CMBLQ96DG6 245 aa15.03■□□□□ -0
HDDC3-201ENST00000330334 SAMD8Q96LT4 415 aa15.03■□□□□ -0
HDDC3-201ENST00000330334 ERMAPQ96PL5 475 aaPredicted RBP15.03■□□□□ -0
HDDC3-201ENST00000330334 IGLV1-36A0A0B4J1U3 117 aa15.02■□□□□ -0
HDDC3-201ENST00000330334 J3QLI3 93 aa15.02■□□□□ -0
HDDC3-201ENST00000330334 ARPC2O15144 300 aa15.02■□□□□ -0
HDDC3-201ENST00000330334 RER1O15258 196 aa15.02■□□□□ -0
HDDC3-201ENST00000330334 PLPP2O43688 288 aa15.02■□□□□ -0
HDDC3-201ENST00000330334 DCTN3O75935 186 aa15.02■□□□□ -0
HDDC3-201ENST00000330334 KRT36O76013 467 aa15.02■□□□□ -0
HDDC3-201ENST00000330334 FABP3P05413 133 aa15.02■□□□□ -0
HDDC3-201ENST00000330334 TNFRSF1AP19438 455 aa15.02■□□□□ -0
HDDC3-201ENST00000330334 TNFSF4P23510 183 aa15.02■□□□□ -0
HDDC3-201ENST00000330334 GATA3P23771 443 aa15.02■□□□□ -0
HDDC3-201ENST00000330334 GSSP48637 474 aa15.02■□□□□ -0
HDDC3-201ENST00000330334 MNAT1P51948 309 aa15.02■□□□□ -0
HDDC3-201ENST00000330334 HMGA2P52926 109 aa15.02■□□□□ -0
HDDC3-201ENST00000330334 TNFAIP6P98066 277 aaPredicted RBP15.02■□□□□ -0
HDDC3-201ENST00000330334 SPIBQ01892 262 aa15.02■□□□□ -0
HDDC3-201ENST00000330334 C1orf94Q6P1W5 598 aa15.02■□□□□ -0
HDDC3-201ENST00000330334 FAHD2BQ6P2I3 314 aaPredicted RBP15.02■□□□□ -0
HDDC3-201ENST00000330334 C16orf89Q6UX73 402 aa15.02■□□□□ -0
HDDC3-201ENST00000330334 OR5L1Q8NGL2 311 aa15.02■□□□□ -0
HDDC3-201ENST00000330334 FANK1Q8TC84 345 aa15.02■□□□□ -0
HDDC3-201ENST00000330334 FAHD2AQ96GK7 314 aa15.02■□□□□ -0
HDDC3-201ENST00000330334 COQ7Q99807 217 aa15.02■□□□□ -0
HDDC3-201ENST00000330334 HDHD2Q9H0R4 259 aa15.02■□□□□ -0
HDDC3-201ENST00000330334 OR52D1Q9H346 318 aa15.02■□□□□ -0
HDDC3-201ENST00000330334 RERGLQ9H628 205 aa15.02■□□□□ -0
HDDC3-201ENST00000330334 IL19Q9UHD0 177 aa15.02■□□□□ -0
HDDC3-201ENST00000330334 B9D1Q9UPM9 204 aa15.02■□□□□ -0
HDDC3-201ENST00000330334 A0A0G2JMP0 313 aa15.01□□□□□ -0.01
HDDC3-201ENST00000330334 A0A0X1KG70 313 aa15.01□□□□□ -0.01
HDDC3-201ENST00000330334 DCTN6O00399 190 aa15.01□□□□□ -0.01
HDDC3-201ENST00000330334 SURF4O15260 269 aa15.01□□□□□ -0.01
HDDC3-201ENST00000330334 OR10H3O60404 316 aa15.01□□□□□ -0.01
HDDC3-201ENST00000330334 PPP1R3DO95685 299 aa15.01□□□□□ -0.01
HDDC3-201ENST00000330334 COX10Q12887 443 aa15.01□□□□□ -0.01
HDDC3-201ENST00000330334 FBXW12Q6X9E4 464 aa15.01□□□□□ -0.01
HDDC3-201ENST00000330334 Q6ZR03 302 aa15.01□□□□□ -0.01
HDDC3-201ENST00000330334 ZBTB46Q86UZ6 589 aa15.01□□□□□ -0.01
HDDC3-201ENST00000330334 OR6V1Q8N148 313 aa15.01□□□□□ -0.01
HDDC3-201ENST00000330334 ZNF283Q8N7M2 679 aa15.01□□□□□ -0.01
HDDC3-201ENST00000330334 OR4M2Q8NGB6 313 aa15.01□□□□□ -0.01
HDDC3-201ENST00000330334 ZFAND2BQ8WV99 257 aa15.01□□□□□ -0.01
HDDC3-201ENST00000330334 TSSK2Q96PF2 358 aa15.01□□□□□ -0.01
HDDC3-201ENST00000330334 POFUT1Q9H488 388 aa15.01□□□□□ -0.01
HDDC3-201ENST00000330334 METTL17Q9H7H0 456 aaPredicted RBP15.01□□□□□ -0.01
HDDC3-201ENST00000330334 ARL8BQ9NVJ2 186 aa15.01□□□□□ -0.01
HDDC3-201ENST00000330334 TMCC3Q9ULS5 477 aa15.01□□□□□ -0.01
HDDC3-201ENST00000330334 NPTNQ9Y639 398 aa15.01□□□□□ -0.01
HDDC3-201ENST00000330334 LHFPL6Q9Y693 200 aa15.01□□□□□ -0.01
HDDC3-201ENST00000330334 V9GYQ6 96 aa15.01□□□□□ -0.01
HDDC3-201ENST00000330334 PPIAL4EA0A075B759 164 aa15□□□□□ -0.01
HDDC3-201ENST00000330334 PPIAL4CA0A0B4J2A2 164 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms