RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 NGFP01138 241 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 TFP02787 698 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 LCKP06239 509 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 H1F0P07305 194 aaKnown RBP8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 CD55P08174 381 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 HSD17B1P14061 328 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 NCK1P16333 377 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 MSR1P21757 451 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 LIPAP38571 399 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 GPR4P46093 362 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 GPR6P46095 362 aaPredicted RBP8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 ERVK-25P63136 954 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 CCL8P80075 99 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 SEC23BQ15437 767 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 KCNMB1Q16558 191 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 NKPD1Q17RQ9 610 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 MESTQ5EB52 335 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 GLYATQ6IB77 296 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 UNQ6126/PRO20091Q6UXV3 157 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 RFPL4BQ6ZWI9 263 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 ALDH16A1Q8IZ83 802 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 FAM86B1Q8N7N1 296 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 SLC25A40Q8TBP6 338 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 KLF14Q8TD94 323 aaPredicted RBP8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 GPA33Q99795 319 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 VSX1Q9NZR4 365 aaPredicted RBP8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 EIF3KQ9UBQ5 218 aaKnown RBP8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 GRHPRQ9UBQ7 328 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 CGGBP1Q9UFW8 167 aaPredicted RBP8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 OR6C6A6NF89 314 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 DEAF1O75398 565 aaPredicted RBP8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 NDUFB2O95178 105 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 IGHV1-46P01743 117 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 MSMBP08118 114 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 T-ENOLP0DO92 83 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 GAAP10253 952 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 CTLA4P16410 223 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 HNF1AP20823 631 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 SDHAP31040 664 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 MPV17P39210 176 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 LSM6P62312 80 aaKnown RBP8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 HIST1H3AP68431 136 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 TEKQ02763 1124 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 CDK5R2Q13319 367 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 SPATS1Q496A3 300 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 HIST2H3PS2Q5TEC6 136 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 ZNF774Q6NX45 483 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 TMEM154Q6P9G4 183 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 DPY19L2P2Q6ZN68 376 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 IL17RELQ6ZVW7 336 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 HIST2H3AQ71DI3 136 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 ZER1Q7Z7L7 766 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 CYP4Z1Q86W10 505 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 PGAM4Q8N0Y7 254 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 GTF3AQ92664 365 aaKnown RBP8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 FAM162AQ96A26 154 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 TMEM186Q96B77 213 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 C4orf45Q96LM5 186 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 BTBD10Q9BSF8 475 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 OR2J1Q9GZK6 312 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 OR51B6Q9H340 312 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 MMADHCQ9H3L0 296 aaPredicted RBP8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 CYSLTR2Q9NS75 346 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 TREM2Q9NZC2 230 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 EGFL7Q9UHF1 273 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 SAMD4AQ9UPU9 718 aaKnown RBP8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 SVEP1Q4LDE5 3571 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 WNK2Q9Y3S1 2297 aa8.26□□□□□ -1.09
TMEM39A-210ENST00000490099 IGHV1-69-2A0A0G2JMI3 117 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 ZSCAN5BA6NJL1 495 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 H7C1C5 153 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 IMPA2O14732 288 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 ARPC3O15145 178 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 PPIHO43447 177 aaKnown RBP8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 MT-ND5P03915 603 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 PCMT1P22061 227 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 RPL4P36578 427 aaKnown RBP8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 CDKN2AP42771 156 aaKnown RBP8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 GUCA1AP43080 201 aaPredicted RBP8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 ZNF81P51508 661 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 HMGA2P52926 109 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 PPP1CBP62140 327 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 LCN6P62502 163 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 SCRN3Q0VDG4 424 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 PSG7Q13046 419 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 CCNIQ14094 377 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 ALKBH6Q3KRA9 238 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 KRTAP27-1Q3LI81 207 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 C1orf229Q6ZS94 237 aaPredicted RBP8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 PTCHD4Q6ZW05 846 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 RRM2BQ7LG56 351 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 ADCK1Q86TW2 530 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 GLB1L2Q8IW92 636 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 RFLNBQ8N5W9 214 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 SNX33Q8WV41 574 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 IPCEF1Q8WWN9 437 aaPredicted RBP8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 MCUR1Q96AQ8 359 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 HAVCR1Q96D42 359 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 PYURFQ96I23 114 aa8.25□□□□□ -1.09
TMEM39A-210ENST00000490099 FAM46AQ96IP4 442 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms