RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 MAD2L1BPQ15013 274 aaPredicted RBP0.62□□□□□ -2.31
CCDC93-209ENST00000488908 QPRTQ15274 297 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 ZNF77Q15935 545 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 RNASE13Q5GAN3 156 aaKnown RBP0.62□□□□□ -2.31
CCDC93-209ENST00000488908 TCEAL5Q5H9L2 206 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 PDZK1Q5T2W1 519 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 H3F3CQ6NXT2 135 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 TMEM136Q6ZRR5 245 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 SLC25A48Q6ZT89 311 aaKnown RBP0.62□□□□□ -2.31
CCDC93-209ENST00000488908 SLC35G3Q8N808 338 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 Q8NDZ9 215 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 CXorf40AQ8TE69 158 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 TCEAL3Q969E4 200 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 PLEKHA8Q96JA3 519 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 SERPINB12Q96P63 405 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 MTMR9Q96QG7 549 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 PANX2Q96RD6 677 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 ZNF607Q96SK3 696 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 RHOXF2Q9BQY4 288 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 SLC39A3Q9BRY0 314 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 ZSCAN16Q9H4T2 348 aaPredicted RBP0.62□□□□□ -2.31
CCDC93-209ENST00000488908 ETNK2Q9NVF9 386 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 CHRNA9Q9UGM1 479 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 SH3BGRL2Q9UJC5 107 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 ADAM28Q9UKQ2 775 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 PEX16Q9Y5Y5 336 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 KCNE3Q9Y6H6 103 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 ATP10AO60312 1499 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 TRAV26-1A0A087WT03 109 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 IGHV1-3A0A0C4DH29 117 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 RGSL1A5PLK6 1076 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 GOSR2O14653 212 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 MRPS12O15235 138 aaKnown RBP0.61□□□□□ -2.31
CCDC93-209ENST00000488908 EIF1BO60739 113 aaKnown RBP0.61□□□□□ -2.31
CCDC93-209ENST00000488908 C1orf105O95561 183 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 PAHP00439 452 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 IFNB1P01574 187 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 IGHV3-11P01762 117 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 CD3GP09693 182 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 OR5H8P0DN80 308 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 CEACAM3P40198 252 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 EIF1P41567 113 aaKnown RBP0.61□□□□□ -2.31
CCDC93-209ENST00000488908 HCAR3P49019 387 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 PRLHRP49683 370 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 SSR4P51571 173 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 P2RX1P51575 399 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 IRX3P78415 501 aaPredicted RBP0.61□□□□□ -2.31
CCDC93-209ENST00000488908 CDK5Q00535 292 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 BIKQ13323 160 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 DEFB134Q4QY38 66 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 YIF1BQ5BJH7 314 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 SPECC1LQ69YQ0 1117 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 ADNP2Q6IQ32 1131 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 ADM2Q7Z4H4 148 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 CDR2LQ86X02 465 aaPredicted RBP0.61□□□□□ -2.31
CCDC93-209ENST00000488908 PDIK1LQ8N165 341 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 EID2Q8N6I1 236 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 GMCL1P1Q8NEA9 526 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 CMTM2Q8TAZ6 248 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 THRSPQ92748 146 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 DCPSQ96C86 337 aaKnown RBP0.61□□□□□ -2.31
CCDC93-209ENST00000488908 PSKH2Q96QS6 385 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 CHCHD7Q9BUK0 85 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 TRIM62Q9BVG3 475 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 FGF23Q9GZV9 251 aaPredicted RBP0.61□□□□□ -2.31
CCDC93-209ENST00000488908 ANKRD19PQ9H560 264 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 SLC38A10Q9HBR0 1119 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 KCNJ16Q9NPI9 418 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 PARP11Q9NR21 331 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 SLC35D1Q9NTN3 355 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 RHBDL2Q9NX52 303 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 C21orf62Q9NYP8 219 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 TAS2R1Q9NYW7 299 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 EPS15L1Q9UBC2 864 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 SLC7A8Q9UHI5 535 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 TSSC4Q9Y5U2 329 aaPredicted RBP0.61□□□□□ -2.31
CCDC93-209ENST00000488908 TRIP11Q15643 1979 aa0.61□□□□□ -2.31
CCDC93-209ENST00000488908 TICRRQ7Z2Z1 1910 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 MUC5BQ9HC84 5762 aaPredicted RBP0.6□□□□□ -2.31
CCDC93-209ENST00000488908 IGHV3-49A0A0A0MS15 119 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 CDC7O00311 574 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 PSTPIP1O43586 416 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 CDC40O60508 579 aaKnown RBP eCLIP0.6□□□□□ -2.31
CCDC93-209ENST00000488908 DPM1O60762 260 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 EEDO75530 441 aaKnown RBP0.6□□□□□ -2.31
CCDC93-209ENST00000488908 SEMA3DO95025 777 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 KLHL2O95198 593 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 H6PDO95479 791 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 TSPAN12O95859 305 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 LHBP01229 141 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 IGLV3-25P01717 112 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 IQCF3P0C7M6 154 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 PSMA5P28066 241 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 IFNA8P32881 189 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 ACAA2P42765 397 aaKnown RBP0.6□□□□□ -2.31
CCDC93-209ENST00000488908 MAGEA8P43361 318 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 SYKP43405 635 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 GALR1P47211 349 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 SYNJ2BPP57105 145 aa0.6□□□□□ -2.31
CCDC93-209ENST00000488908 GPX6P59796 221 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms