RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 DHPSP49366 369 aaPredicted RBP12.49□□□□□ -0.41
HDAC1-206ENST00000476391 PDX1P52945 283 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 RAB11BQ15907 218 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 DUSP5Q16690 384 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 PDZD11Q5EBL8 140 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 VITQ6UXI7 678 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 C5orf24Q7Z6I8 188 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 PEG10Q86TG7 708 aaKnown RBP12.49□□□□□ -0.41
HDAC1-206ENST00000476391 OR9K2Q8NGE7 335 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 RNASEH2CQ8TDP1 164 aaKnown RBP12.49□□□□□ -0.41
HDAC1-206ENST00000476391 HPSE2Q8WWQ2 592 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 ACTR3CQ9C0K3 210 aaPredicted RBP12.49□□□□□ -0.41
HDAC1-206ENST00000476391 CRLF2Q9HC73 371 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 B4GALT6Q9UBX8 382 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 TMEM269A0A1B0GVZ9 245 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 SLC38A8A6NNN8 435 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 C1QTNF3-AMACRE9PGA6 284 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 SLC17A2O00624 439 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 CXCL11O14625 94 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 JTBO76095 146 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 HOXC8P31273 242 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 FAM3AP98173 230 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 SLC9A5Q14940 896 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 EBPQ15125 230 aaKnown RBP12.49□□□□□ -0.41
HDAC1-206ENST00000476391 OR1Q1Q15612 314 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 MIDNQ504T8 468 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 C9orf64Q5T6V5 341 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 SLC22A25Q6T423 547 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 TMPPEQ6ZT21 453 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 LANCL3Q6ZV70 420 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.49□□□□□ -0.41
HDAC1-206ENST00000476391 FAM220AQ7Z4H9 259 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 SCAMP4Q969E2 229 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 ZNF689Q96CS4 500 aaPredicted RBP12.49□□□□□ -0.41
HDAC1-206ENST00000476391 BSCL2Q96G97 398 aaPredicted RBP12.49□□□□□ -0.41
HDAC1-206ENST00000476391 Q96M85 177 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 EPHX3Q9H6B9 360 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 PLA2G2EQ9NZK7 142 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 OR5AC2Q9NZP5 309 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 CHRNA9Q9UGM1 479 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 MMP24Q9Y5R2 645 aa12.49□□□□□ -0.41
HDAC1-206ENST00000476391 A0A087WWC5 75 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 A0A0A6YYH2 397 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 TMEM235A6NFC5 223 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 A6NJ64 397 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 CRTAPO75718 401 aaPredicted RBP12.48□□□□□ -0.41
HDAC1-206ENST00000476391 HIST1H1CP16403 213 aaKnown RBP12.48□□□□□ -0.41
HDAC1-206ENST00000476391 MSX1P28360 303 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 TAS2R31P59538 309 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 ELOBQ15370 118 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 FAM46CQ5VWP2 391 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 GGNBP1Q5YKI7 109 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 TRAPPC5Q8IUR0 188 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 ZNF584Q8IVC4 421 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 ZNF595Q8IYB9 648 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 NUP43Q8NFH3 380 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 OR4K13Q8NH42 304 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 ZNF563Q8TA94 476 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 THRSPQ92748 146 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 TMEM106AQ96A25 262 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 MRGPRFQ96AM1 343 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 SLC22A18Q96BI1 424 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 RSPRY1Q96DX4 576 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 AIF1LQ9BQI0 150 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 PBDC1Q9BVG4 233 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 TMEM106CQ9BVX2 250 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 SMDT1Q9H4I9 107 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 RAB18Q9NP72 206 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 FAM212BQ9NTI7 297 aaPredicted RBP12.48□□□□□ -0.41
HDAC1-206ENST00000476391 WSB2Q9NYS7 404 aaPredicted RBP12.48□□□□□ -0.41
HDAC1-206ENST00000476391 FRRS1LQ9P0K9 344 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 OR14J1Q9UGF5 321 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 AMDHD2Q9Y303 409 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 A0A0A6YYD5 115 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 DUXAA6NLW8 204 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 NDUFS4O43181 175 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 STK17BO94768 372 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 METTL15P1P0C7V9 234 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 C6P13671 934 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 FCARP24071 287 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 CHATP28329 748 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 SNRPD1P62314 119 aaKnown RBP12.48□□□□□ -0.41
HDAC1-206ENST00000476391 CLN3Q13286 438 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 OR2T2Q6IF00 324 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 GDF6Q6KF10 455 aaPredicted RBP12.48□□□□□ -0.41
HDAC1-206ENST00000476391 TRAM1L1Q8N609 369 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 WFDC5Q8TCV5 224 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 TNFRSF13CQ96RJ3 184 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 HIST1H2BLQ99880 126 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 SNHG12Q9BXW3 62 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 ELP3Q9H9T3 547 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 PDE7BQ9NP56 450 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 LAMP5Q9UJQ1 280 aa12.48□□□□□ -0.41
HDAC1-206ENST00000476391 PLXNA2O75051 1894 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 VWA8A3KMH1 1905 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 M0R143 59 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 RAB27BO00194 218 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 ERAL1O75616 437 aaKnown RBP12.47□□□□□ -0.41
HDAC1-206ENST00000476391 UPK3AO75631 287 aa12.47□□□□□ -0.41
HDAC1-206ENST00000476391 GZMBP10144 247 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms