RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 TMEM200CA6NKL6 621 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 C17orf51A8MQB3 221 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 ZNF264O43296 627 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 SPARCP09486 303 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 TFF2Q03403 129 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 PAPD4Q6PIY7 484 aaKnown RBP11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 LYG2Q86SG7 212 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 ADGRE4PQ86SQ3 457 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 CCDC36Q8IYA8 594 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 AVL9Q8NBF6 648 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 ASB12Q8WXK4 309 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 GAS2L1Q99501 681 aaPredicted RBP11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 TCEAL2Q9H3H9 227 aaPredicted RBP11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 TMED7Q9Y3B3 224 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 KNL1Q8NG31 2342 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 LOC100509620A0A075B734 347 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 RAB19A4D1S5 217 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 F5H0A9 414 aaPredicted RBP11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 PLGP00747 810 aaPredicted RBP11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 BGLAPP02818 100 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 HPGDP15428 266 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 AVPR2P30518 371 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 INSM1Q01101 510 aaPredicted RBP11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 ROM1Q03395 351 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 SPOCK1Q08629 439 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 CCINQ13939 588 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 ELOCQ15369 112 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 INPP5JQ15735 1006 aaPredicted RBP11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 TMEM31Q5JXX7 168 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 PRAMEF17Q5VTA0 474 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 SLC18B1Q6NT16 456 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 UNQ6126/PRO20091Q6UXV3 157 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 RHOUQ7L0Q8 258 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 CATSPERDQ86XM0 798 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 SLC37A2Q8TED4 501 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 ASB17Q8WXJ9 295 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 SLC25A44Q96H78 314 aaPredicted RBP11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 MBD2Q9UBB5 411 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 GMEB2Q9UKD1 530 aa11.67□□□□□ -0.54
PDZRN3-205ENST00000466780 C9orf170A2RU37 121 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 FAM25EA8MYX2 175 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 H7C2Y5 167 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 IL2RAP01589 272 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 DCNP07585 359 aaKnown RBP11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 CELA2BP08218 269 aaPredicted RBP11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 EN2P19622 333 aaPredicted RBP11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 FSTP19883 344 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 NTSR1P30989 418 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 CXADRP78310 365 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 SERTAD2Q14140 314 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 PRTGQ2VWP7 1150 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 SLC22A6Q4U2R8 563 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 POMZP3Q6PJE2 187 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 CHRDL2Q6WN34 429 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 CBLN2Q8IUK8 224 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 FAM160A2Q8N612 972 aaPredicted RBP11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 ZNF321PQ8N8H1 164 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 ACBD4Q8NC06 268 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 ZNF563Q8TA94 476 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 MITD1Q8WV92 249 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 ADAM19Q9H013 955 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 CKLFQ9UBR5 152 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 ZNF107Q9UII5 783 aaPredicted RBP11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 IGLV1-36A0A0B4J1U3 117 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 TNFRSF10CO14798 259 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 FGF16O43320 207 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 LMX1BO60663 402 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 SLC16A7O60669 478 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 UTS2O95399 124 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 ACTL6AO96019 429 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 MAOBP27338 520 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 RPL35P42766 123 aaKnown RBP11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 SRSF3P84103 164 aaKnown RBP11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 TOMM34Q15785 309 aaPredicted RBP11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 ZNF813Q6ZN06 617 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 ZNF584Q8IVC4 421 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 OR5AP2Q8NGF4 316 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 ZNF587Q96SQ5 575 aaPredicted RBP11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 ABHD6Q9BV23 337 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 NUDT9Q9BW91 350 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 SLC2A8Q9NY64 477 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 MRPS33Q9Y291 106 aaKnown RBP11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 RHBDD3Q9Y3P4 386 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 LRP12Q9Y561 859 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 PRSS37A4D1T9 235 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 FAM221BA6H8Z2 402 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 OR6C76A6NM76 312 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 SCDO00767 359 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 XKRYO14609 159 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 LINC01565O15544 149 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 CD2P06729 351 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 ATXN8OSP0DMR3 200 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 CTLA4P16410 223 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 HOXA1P49639 335 aaPredicted RBP11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 PRKXP51817 358 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 SKP1P63208 163 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 SCRN3Q0VDG4 424 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 SQSTM1Q13501 440 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 ACKR1Q16570 336 aa11.66□□□□□ -0.54
PDZRN3-205ENST00000466780 CDNFQ49AH0 187 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms