RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 IGHV3OR16-13A0A075B7E8 117 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 A0A096LNT2 108 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 A0A0G2JN53 185 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 SPTY2D1-AS1A0A0U1RR47 76 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 PP2D1A8MPX8 630 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 SULT2B1O00204 365 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 SLC9A3R1O14745 358 aaPredicted RBP0.74□□□□□ -2.29
LRCH3-209ENST00000452660 SPAG6O75602 509 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 DEDDO75618 318 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 OLFM2O95897 454 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 IL1BP01584 269 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 PTNP21246 168 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 CD70P32970 193 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 SRP14P37108 136 aaKnown RBP0.74□□□□□ -2.29
LRCH3-209ENST00000452660 ASIPP42127 132 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 PITPNBP48739 271 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 TUFMP49411 452 aaKnown RBP0.74□□□□□ -2.29
LRCH3-209ENST00000452660 CCR8P51685 355 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 GFERP55789 205 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 MLF1P58340 268 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 SLC7A9P82251 487 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 BDH1Q02338 343 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 ST3GAL3Q11203 375 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 ATXN7L3Q14CW9 347 aaPredicted RBP0.74□□□□□ -2.29
LRCH3-209ENST00000452660 PSG5Q15238 335 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 NCR3LG1Q68D85 454 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 NEK5Q6P3R8 708 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 CERS6Q6ZMG9 384 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 Q6ZPB1 254 aaPredicted RBP0.74□□□□□ -2.29
LRCH3-209ENST00000452660 PLA2G4DQ86XP0 818 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 SYCP3Q8IZU3 236 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 MTURNQ8N3F0 131 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 CCDC89Q8N998 374 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 SNX31Q8N9S9 440 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 CCDC112Q8NEF3 446 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 OR10G9Q8NGN4 311 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 C22orf15Q8WYQ4 148 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 PDXPQ96GD0 296 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 SENP8Q96LD8 212 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 C18orf15Q96N68 181 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 ZNF396Q96N95 335 aaPredicted RBP0.74□□□□□ -2.29
LRCH3-209ENST00000452660 OSBPL8Q9BZF1 889 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 SELENOIQ9C0D9 397 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 METTL17Q9H7H0 456 aaPredicted RBP0.74□□□□□ -2.29
LRCH3-209ENST00000452660 XPNPEP1Q9NQW7 623 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 HOMER3Q9NSC5 361 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 NRBP2Q9NSY0 501 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 SPASTQ9UBP0 616 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 RPUSD1Q9UJJ7 312 aaKnown RBP0.74□□□□□ -2.29
LRCH3-209ENST00000452660 FARSAQ9Y285 508 aaKnown RBP0.74□□□□□ -2.29
LRCH3-209ENST00000452660 U3KQK5 164 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 MACF1Q9UPN3 7388 aaKnown RBP0.74□□□□□ -2.29
LRCH3-209ENST00000452660 ANKRD12Q6UB98 2062 aa0.74□□□□□ -2.29
LRCH3-209ENST00000452660 IGLV3-22A0A075B6J6 115 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 IGHV1OR21-1A0A087WYE8 117 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 LRRIQ4A6NIV6 560 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 IDSB3KWA1 339 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 SCAMP2O15127 329 aaKnown RBP0.73□□□□□ -2.29
LRCH3-209ENST00000452660 CDC40O60508 579 aaKnown RBP eCLIP0.73□□□□□ -2.29
LRCH3-209ENST00000452660 ATP6V1G1O75348 118 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 SURF6O75683 361 aaKnown RBP0.73□□□□□ -2.29
LRCH3-209ENST00000452660 LCA5LO95447 670 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 ADCY5O95622 1261 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 TSPAN12O95859 305 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 TGFAP01135 160 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 ALPPP05187 535 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 FGF1P05230 155 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 CAPN1P07384 714 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 INAFM2P0DMQ5 153 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 CALM1P0DP23 149 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 CALM2P0DP24 149 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 CALM3P0DP25 149 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 CTSEP14091 401 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 AREGP15514 252 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 TPSB2P20231 275 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 GLRA2P23416 452 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 AK4P27144 223 aaPredicted RBP0.73□□□□□ -2.29
LRCH3-209ENST00000452660 AKT2P31751 481 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 RFC3P40938 356 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 PPP1CAP62136 330 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 RPS15P62841 145 aaKnown RBP0.73□□□□□ -2.29
LRCH3-209ENST00000452660 ARG2P78540 354 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 KLHL30Q0D2K2 578 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 PDIA5Q14554 519 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 WDR43Q15061 677 aaKnown RBP eCLIP0.73□□□□□ -2.29
LRCH3-209ENST00000452660 TPSAB1Q15661 275 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 CEP55Q53EZ4 464 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 IFI44LQ53G44 452 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 KLF17Q5JT82 389 aaPredicted RBP0.73□□□□□ -2.29
LRCH3-209ENST00000452660 C9orf64Q5T6V5 341 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 LELP1Q5T871 98 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 PIP5KL1Q5T9C9 394 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 SPECC1LQ69YQ0 1117 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 ALKAL1Q6UXT8 129 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 SYT10Q6XYQ8 523 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 FAM43BQ6ZT52 329 aaPredicted RBP0.73□□□□□ -2.29
LRCH3-209ENST00000452660 C1orf186Q6ZWK4 172 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 KCTD9Q7L273 389 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 TAF8Q7Z7C8 310 aa0.73□□□□□ -2.29
LRCH3-209ENST00000452660 TRIM69Q86WT6 500 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms