RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 PPIL3Q9H2H8 161 aaKnown RBP4.45□□□□□ -1.7
LINC00458-202ENST00000427299 LRRN3Q9H3W5 708 aa4.45□□□□□ -1.7
LINC00458-202ENST00000427299 GLIPR2Q9H4G4 154 aa4.45□□□□□ -1.7
LINC00458-202ENST00000427299 MRPS30Q9NP92 439 aaKnown RBP4.45□□□□□ -1.7
LINC00458-202ENST00000427299 POLE3Q9NRF9 147 aa4.45□□□□□ -1.7
LINC00458-202ENST00000427299 PHPT1Q9NRX4 125 aaPredicted RBP4.45□□□□□ -1.7
LINC00458-202ENST00000427299 ZNF275Q9NSD4 429 aaPredicted RBP4.45□□□□□ -1.7
LINC00458-202ENST00000427299 MCUBQ9NWR8 336 aa4.45□□□□□ -1.7
LINC00458-202ENST00000427299 TEX10Q9NXF1 929 aaPredicted RBP4.45□□□□□ -1.7
LINC00458-202ENST00000427299 B3GNT2Q9NY97 397 aa4.45□□□□□ -1.7
LINC00458-202ENST00000427299 IL20Q9NYY1 176 aa4.45□□□□□ -1.7
LINC00458-202ENST00000427299 ABRACLQ9P1F3 81 aa4.45□□□□□ -1.7
LINC00458-202ENST00000427299 ZNF624Q9P2J8 865 aaPredicted RBP4.45□□□□□ -1.7
LINC00458-202ENST00000427299 COMMD3Q9UBI1 195 aa4.45□□□□□ -1.7
LINC00458-202ENST00000427299 EXTL2Q9UBQ6 330 aa4.45□□□□□ -1.7
LINC00458-202ENST00000427299 DUX4Q9UBX2 424 aa4.45□□□□□ -1.7
LINC00458-202ENST00000427299 MALT1Q9UDY8 824 aa4.45□□□□□ -1.7
LINC00458-202ENST00000427299 NUFIP1Q9UHK0 495 aaKnown RBP4.45□□□□□ -1.7
LINC00458-202ENST00000427299 NUP50Q9UKX7 468 aa4.45□□□□□ -1.7
LINC00458-202ENST00000427299 ZNF443Q9Y2A4 671 aaPredicted RBP4.45□□□□□ -1.7
LINC00458-202ENST00000427299 CACNG2Q9Y698 323 aa4.45□□□□□ -1.7
LINC00458-202ENST00000427299 TP53BP1Q12888 1972 aaPredicted RBP4.45□□□□□ -1.7
LINC00458-202ENST00000427299 A0A087WUU8 490 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 A0A087WV48 116 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 ARPC4-TTLL3A0A0A6YYG9 625 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 A0A1B0GTQ1 180 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 C7orf66A4D0T2 115 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 TRAPPC13A5PLN9 417 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 NAP1L6A6NFF2 107 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 CPSF4LA6NMK7 179 aaKnown RBP4.44□□□□□ -1.7
LINC00458-202ENST00000427299 WASHC1A8K0Z3 465 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 ZNF879B4DU55 563 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 FAM90A26D6RGX4 464 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 SOCS6O14544 535 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 ERI3O43414 337 aaKnown RBP4.44□□□□□ -1.7
LINC00458-202ENST00000427299 HPGDSO60760 199 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 REM1O75628 298 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 UBL3O95164 117 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 CRYZL1O95825 349 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 AIFM1O95831 613 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 EGFP01133 1207 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 PCCBP05166 539 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 HMGN2P05204 90 aaKnown RBP4.44□□□□□ -1.7
LINC00458-202ENST00000427299 SERPIND1P05546 499 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 DBIP07108 87 aaKnown RBP4.44□□□□□ -1.7
LINC00458-202ENST00000427299 LIMS3P0CW19 117 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 LIMS4P0CW20 117 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 IGHV4-30-4P0DP06 118 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 F3P13726 295 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 PRG2P13727 222 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 GNSP15586 552 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 CELP19835 753 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 M6PRP20645 277 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 ANOS1P23352 680 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 BDKRB2P30411 391 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 SLC6A1P30531 599 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 FAUP35544 74 aaKnown RBP4.44□□□□□ -1.7
LINC00458-202ENST00000427299 TRIM23P36406 574 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 OMPP47874 163 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 RFX3P48380 749 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 PITPNBP48739 271 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 EVX1P49640 407 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 VEGFCP49767 419 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 CSNK1G2P78368 415 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 TNFRSF17Q02223 184 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 PRDX1Q06830 199 aaKnown RBP4.44□□□□□ -1.7
LINC00458-202ENST00000427299 LGALS3BPQ08380 585 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 FUT5Q11128 374 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 KRT33BQ14525 404 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 MAPK14Q16539 360 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 OR2G6Q5TZ20 316 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 AADACL4Q5VUY2 407 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 SFXN4Q6P4A7 337 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 ZCCHC12Q6PEW1 402 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 SMARCD3Q6STE5 483 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 TMEM107Q6UX40 140 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 ZNF547Q8IVP9 402 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 YIPF7Q8N8F6 280 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 SLC37A3Q8NCC5 494 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 OR4D11Q8NGI4 311 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 SPRYD4Q8WW59 207 aaPredicted RBP4.44□□□□□ -1.7
LINC00458-202ENST00000427299 ASB13Q8WXK3 278 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 SORCS1Q8WY21 1168 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 SUSD6Q92537 303 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 TM9SF4Q92544 642 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 FGF11Q92914 225 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 HGDQ93099 445 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 UCN3Q969E3 161 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 TMEM203Q969S6 136 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 C12orf66Q96MD2 445 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 UHRF2Q96PU4 802 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 OR7D2Q96RA2 312 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 F2RL3Q96RI0 385 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 STACQ99469 402 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 SOSTQ9BQB4 213 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 ABHD6Q9BV23 337 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 PLA2G12AQ9BZM1 189 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 SLC38A1Q9H2H9 487 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 EGLN3Q9H6Z9 239 aa4.44□□□□□ -1.7
LINC00458-202ENST00000427299 TBC1D17Q9HA65 648 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms