RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 ZNF468Q5VIY5 522 aaPredicted RBP11.01□□□□□ -0.65
UBR4-205ENST00000417040 ABHD17CQ6PCB6 329 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 SLC39A11Q8N1S5 342 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 LCORQ96JN0 433 aaPredicted RBP11.01□□□□□ -0.65
UBR4-205ENST00000417040 SLC22A13Q9Y226 551 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 MN1Q10571 1320 aaPredicted RBP11.01□□□□□ -0.65
UBR4-205ENST00000417040 SCN11AQ9UI33 1791 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 ACSM4P0C7M7 580 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 OR2T2Q6IF00 324 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 ZNF813Q6ZN06 617 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 GCNT2Q8N0V5 402 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 B3GALT5Q9Y2C3 310 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 PHOX2AO14813 284 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 PSMB6P28072 239 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 RPL12P30050 165 aaKnown RBP11.01□□□□□ -0.65
UBR4-205ENST00000417040 ZNF528Q3MIS6 628 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 ZBTB37Q5TC79 503 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 C8orf33Q9H7E9 229 aaPredicted RBP11.01□□□□□ -0.65
UBR4-205ENST00000417040 HEYLQ9NQ87 328 aaPredicted RBP11.01□□□□□ -0.65
UBR4-205ENST00000417040 MBNL1Q9NR56 388 aaKnown RBP11.01□□□□□ -0.65
UBR4-205ENST00000417040 SLC22A11Q9NSA0 550 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 RYDENQ9NUL5 291 aaKnown RBP11.01□□□□□ -0.65
UBR4-205ENST00000417040 M0R082 166 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 OPRM1P35372 400 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 ZNF90Q03938 601 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 LINC00303Q3SY05 128 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 FAM78AQ5JUQ0 283 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 LRRTM1Q86UE6 522 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 ZCCHC4Q9H5U6 513 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 CRLF2Q9HC73 371 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 NSG1A0A0A6YYJ2 146 aa11□□□□□ -0.65
UBR4-205ENST00000417040 ETHE1O95571 254 aa11□□□□□ -0.65
UBR4-205ENST00000417040 QDPRP09417 244 aa11□□□□□ -0.65
UBR4-205ENST00000417040 CDONQ4KMG0 1287 aa11□□□□□ -0.65
UBR4-205ENST00000417040 CLRN3Q8NCR9 226 aa11□□□□□ -0.65
UBR4-205ENST00000417040 OR4N2Q8NGD1 307 aa11□□□□□ -0.65
UBR4-205ENST00000417040 A0A1W2PR48 441 aa11□□□□□ -0.65
UBR4-205ENST00000417040 ZNF587BE7ETH6 402 aa11□□□□□ -0.65
UBR4-205ENST00000417040 SCRG1O75711 98 aa11□□□□□ -0.65
UBR4-205ENST00000417040 FABP4P15090 132 aa11□□□□□ -0.65
UBR4-205ENST00000417040 TGM1P22735 817 aa11□□□□□ -0.65
UBR4-205ENST00000417040 SNCAP37840 140 aa11□□□□□ -0.65
UBR4-205ENST00000417040 GABRA4P48169 554 aa11□□□□□ -0.65
UBR4-205ENST00000417040 MAMSTRQ6ZN01 415 aa11□□□□□ -0.65
UBR4-205ENST00000417040 CATSPERDQ86XM0 798 aa11□□□□□ -0.65
UBR4-205ENST00000417040 FAM26EQ8N5C1 309 aa11□□□□□ -0.65
UBR4-205ENST00000417040 COMMD1Q8N668 190 aa11□□□□□ -0.65
UBR4-205ENST00000417040 NKAIN3Q8N8D7 197 aa11□□□□□ -0.65
UBR4-205ENST00000417040 LYSMD1Q96S90 227 aa11□□□□□ -0.65
UBR4-205ENST00000417040 RSRP1Q9BUV0 290 aa11□□□□□ -0.65
UBR4-205ENST00000417040 SLC6A13Q9NSD5 602 aa11□□□□□ -0.65
UBR4-205ENST00000417040 PYCARD-AS1I3L0S3 204 aa11□□□□□ -0.65
UBR4-205ENST00000417040 LAMTOR5O43504 91 aa11□□□□□ -0.65
UBR4-205ENST00000417040 RFX2P48378 723 aa11□□□□□ -0.65
UBR4-205ENST00000417040 CPEB4Q17RY0 729 aaKnown RBP eCLIP11□□□□□ -0.65
UBR4-205ENST00000417040 C1orf140Q5VVS0 124 aa11□□□□□ -0.65
UBR4-205ENST00000417040 STAC2Q6ZMT1 411 aa11□□□□□ -0.65
UBR4-205ENST00000417040 OR1M1Q8NGA1 313 aa11□□□□□ -0.65
UBR4-205ENST00000417040 OR4S1Q8NGB4 309 aa11□□□□□ -0.65
UBR4-205ENST00000417040 OR5AP2Q8NGF4 316 aa11□□□□□ -0.65
UBR4-205ENST00000417040 OR13D1Q8NGV5 346 aa11□□□□□ -0.65
UBR4-205ENST00000417040 OR6K3Q8NGY3 331 aa11□□□□□ -0.65
UBR4-205ENST00000417040 PPP1R1CQ8WVI7 109 aa11□□□□□ -0.65
UBR4-205ENST00000417040 APH1BQ8WW43 257 aa11□□□□□ -0.65
UBR4-205ENST00000417040 SLC35D1Q9NTN3 355 aa11□□□□□ -0.65
UBR4-205ENST00000417040 FLVCR1Q9Y5Y0 555 aa11□□□□□ -0.65
UBR4-205ENST00000417040 XRCC2O43543 280 aa11□□□□□ -0.65
UBR4-205ENST00000417040 FCMRO60667 390 aa11□□□□□ -0.65
UBR4-205ENST00000417040 FCER1GP30273 86 aa11□□□□□ -0.65
UBR4-205ENST00000417040 CSF2RBP32927 897 aa11□□□□□ -0.65
UBR4-205ENST00000417040 RPS16P62249 146 aaKnown RBP11□□□□□ -0.65
UBR4-205ENST00000417040 DOC2BQ14184 412 aa11□□□□□ -0.65
UBR4-205ENST00000417040 OR8B8Q15620 311 aa11□□□□□ -0.65
UBR4-205ENST00000417040 HSF5Q4G112 596 aaPredicted RBP11□□□□□ -0.65
UBR4-205ENST00000417040 ADIPOR2Q86V24 386 aa11□□□□□ -0.65
UBR4-205ENST00000417040 SKA3Q8IX90 412 aa11□□□□□ -0.65
UBR4-205ENST00000417040 OR2L13Q8N349 312 aa11□□□□□ -0.65
UBR4-205ENST00000417040 PRSS35Q8N3Z0 413 aa11□□□□□ -0.65
UBR4-205ENST00000417040 OR2AK2Q8NG84 335 aa11□□□□□ -0.65
UBR4-205ENST00000417040 OR10J5Q8NHC4 309 aa11□□□□□ -0.65
UBR4-205ENST00000417040 OR14A16Q8NHC5 309 aa11□□□□□ -0.65
UBR4-205ENST00000417040 RHBDD1Q8TEB9 315 aa11□□□□□ -0.65
UBR4-205ENST00000417040 H1FXQ92522 213 aaKnown RBP11□□□□□ -0.65
UBR4-205ENST00000417040 DUSP21Q9H596 190 aa11□□□□□ -0.65
UBR4-205ENST00000417040 DOT1LQ8TEK3 1739 aa11□□□□□ -0.65
UBR4-205ENST00000417040 H3BQ06 376 aaPredicted RBP10.99□□□□□ -0.65
UBR4-205ENST00000417040 GALR3O60755 368 aaPredicted RBP10.99□□□□□ -0.65
UBR4-205ENST00000417040 TNFSF4P23510 183 aa10.99□□□□□ -0.65
UBR4-205ENST00000417040 RPL27P61353 136 aaKnown RBP10.99□□□□□ -0.65
UBR4-205ENST00000417040 NKG7Q16617 165 aa10.99□□□□□ -0.65
UBR4-205ENST00000417040 SH2D5Q6ZV89 423 aa10.99□□□□□ -0.65
UBR4-205ENST00000417040 OR4C16Q8NGL9 310 aa10.99□□□□□ -0.65
UBR4-205ENST00000417040 LRP3O75074 770 aa10.99□□□□□ -0.65
UBR4-205ENST00000417040 OR2J2O76002 312 aa10.99□□□□□ -0.65
UBR4-205ENST00000417040 GZMKP49863 264 aa10.99□□□□□ -0.65
UBR4-205ENST00000417040 KRTDAPP60985 99 aa10.99□□□□□ -0.65
UBR4-205ENST00000417040 SNRPEP62304 92 aaKnown RBP10.99□□□□□ -0.65
UBR4-205ENST00000417040 LPCAT3Q6P1A2 487 aa10.99□□□□□ -0.65
UBR4-205ENST00000417040 PRSS42Q7Z5A4 293 aa10.99□□□□□ -0.65
UBR4-205ENST00000417040 SIRT6Q8N6T7 355 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms