RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 BCL7CQ8WUZ0 217 aaPredicted RBP18■□□□□ 0.47
SHANK1-203ENST00000391813 TMEM18Q96B42 140 aa18■□□□□ 0.47
SHANK1-203ENST00000391813 LRIT1Q9P2V4 623 aa18■□□□□ 0.47
SHANK1-203ENST00000391813 PHF1O43189 567 aaPredicted RBP18■□□□□ 0.47
SHANK1-203ENST00000391813 OR7C1O76099 320 aaPredicted RBP18■□□□□ 0.47
SHANK1-203ENST00000391813 SLC35E2P0CK97 266 aa18■□□□□ 0.47
SHANK1-203ENST00000391813 TRHRP34981 398 aaPredicted RBP18■□□□□ 0.47
SHANK1-203ENST00000391813 DUSP8Q13202 625 aa18■□□□□ 0.47
SHANK1-203ENST00000391813 SLC25A35Q3KQZ1 300 aa18■□□□□ 0.47
SHANK1-203ENST00000391813 C8orf82Q6P1X6 216 aaPredicted RBP18■□□□□ 0.47
SHANK1-203ENST00000391813 OGFOD3Q6PK18 319 aa18■□□□□ 0.47
SHANK1-203ENST00000391813 EMG1Q92979 244 aaKnown RBP18■□□□□ 0.47
SHANK1-203ENST00000391813 TRAF4Q9BUZ4 470 aaPredicted RBP18■□□□□ 0.47
SHANK1-203ENST00000391813 PTDSS2Q9BVG9 487 aa18■□□□□ 0.47
SHANK1-203ENST00000391813 ZC3H12DA2A288 527 aaKnown RBP17.99■□□□□ 0.47
SHANK1-203ENST00000391813 BET1O15155 118 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 SCAF4O95104 1147 aaKnown RBP17.99■□□□□ 0.47
SHANK1-203ENST00000391813 EMC4Q5J8M3 183 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 CLEC9AQ6UXN8 241 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 OR5M1Q8NGP8 315 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 OR1E3Q8WZA6 343 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 FBXW5Q969U6 566 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 ULBP3Q9BZM4 244 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 PCDHB10Q9UN67 800 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 URB1O60287 2271 aaKnown RBP17.99■□□□□ 0.47
SHANK1-203ENST00000391813 E5RGE8 158 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 H0YGG7 62 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 PYCARD-AS1I3L0S3 204 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 IGHEP01854 428 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 ADRA2CP18825 462 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 DUSP1P28562 367 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 PJVKQ0ZLH3 352 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 PDZD11Q5EBL8 140 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 GLIPR1L1Q6UWM5 242 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 AGBL5Q8NDL9 886 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 HPSE2Q8WWQ2 592 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 C2orf50Q96LR7 162 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 SDF2Q99470 211 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 NECAP2Q9NVZ3 263 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 NSG2Q9Y328 171 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 TRBV5-4A0A0C4DH59 114 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 CCDC163A0A0D9SF12 145 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 TMEM235A6NFC5 223 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 PAX6P26367 422 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 SDHAP31040 664 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 TMEM31Q5JXX7 168 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 PPP1R35Q8TAP8 253 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 SLC6A18Q96N87 628 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 A0A0B4J203 849 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 MT-ATP6P00846 226 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 NQO2P16083 231 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 MCCD1P59942 119 aaPredicted RBP17.99■□□□□ 0.47
SHANK1-203ENST00000391813 SNRPNP63162 240 aaKnown RBP17.99■□□□□ 0.47
SHANK1-203ENST00000391813 B3GNTL1Q67FW5 361 aaPredicted RBP17.99■□□□□ 0.47
SHANK1-203ENST00000391813 C9orf62Q8N4C0 152 aa17.99■□□□□ 0.47
SHANK1-203ENST00000391813 CEBPZOSA8MTT3 80 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 RNASEK-C17orf49H0YIS7 233 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 TRIM61Q5EBN2 209 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 ISG20L2Q9H9L3 353 aaKnown RBP17.98■□□□□ 0.47
SHANK1-203ENST00000391813 MMP26Q9NRE1 261 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 RNF150Q9ULK6 438 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 F5P12259 2224 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 LIM2P55344 173 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 DUSP5Q16690 384 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 SLC38A6Q8IZM9 456 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 SPEM1Q8N4L4 309 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 BPIFCQ8NFQ6 507 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 OR13C5Q8NGS8 318 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 TNFRSF10CO14798 259 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 HIST1H1CP16403 213 aaKnown RBP17.98■□□□□ 0.47
SHANK1-203ENST00000391813 SNCAP37840 140 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 CSNK1EP49674 416 aaKnown RBP17.98■□□□□ 0.47
SHANK1-203ENST00000391813 SFRP5Q5T4F7 317 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 ZNF439Q8NDP4 499 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 C22orf15Q8WYQ4 148 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 MCRIP1C9JLW8 97 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 CHRM4P08173 479 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 KITLGP21583 273 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 AADACP22760 399 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 NKX2-1P43699 371 aaPredicted RBP17.98■□□□□ 0.47
SHANK1-203ENST00000391813 EGR3Q06889 387 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 MITD1Q8WV92 249 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 ZNF251Q9BRH9 671 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 CUTCQ9NTM9 273 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 IL20Q9NYY1 176 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 GNG13Q9P2W3 67 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 AK3Q9UIJ7 227 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 C19orf53Q9UNZ5 99 aaPredicted RBP17.98■□□□□ 0.47
SHANK1-203ENST00000391813 V9GYH0 126 aa17.98■□□□□ 0.47
SHANK1-203ENST00000391813 ZFP92A6NM28 416 aa17.97■□□□□ 0.47
SHANK1-203ENST00000391813 SUSD5O60279 629 aa17.97■□□□□ 0.47
SHANK1-203ENST00000391813 PCBD1P61457 104 aa17.97■□□□□ 0.47
SHANK1-203ENST00000391813 MISPQ8IVT2 679 aa17.97■□□□□ 0.47
SHANK1-203ENST00000391813 ZNF100Q8IYN0 542 aa17.97■□□□□ 0.47
SHANK1-203ENST00000391813 ELF4Q99607 663 aaPredicted RBP17.97■□□□□ 0.47
SHANK1-203ENST00000391813 SGPP1Q9BX95 441 aa17.97■□□□□ 0.47
SHANK1-203ENST00000391813 SLC6A13Q9NSD5 602 aa17.97■□□□□ 0.47
SHANK1-203ENST00000391813 PRKRAO75569 313 aaKnown RBP17.97■□□□□ 0.47
SHANK1-203ENST00000391813 IGHA2P01877 340 aa17.97■□□□□ 0.47
SHANK1-203ENST00000391813 SMIM6P0DI80 62 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms