RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 TMPRSS13Q9BYE2 586 aa16.17■□□□□ 0.18
CD40-201ENST00000372276 ATG5Q9H1Y0 275 aa16.17■□□□□ 0.18
CD40-201ENST00000372276 PTGES2Q9H7Z7 377 aa16.17■□□□□ 0.18
CD40-201ENST00000372276 G6PC2Q9NQR9 355 aa16.17■□□□□ 0.18
CD40-201ENST00000372276 U3KQ87 197 aa16.17■□□□□ 0.18
CD40-201ENST00000372276 A0A087WZY1 265 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 TMEM272A0A1B0GTI8 110 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 LOC102725191A0A1B0GVB3 256 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 METTL21EPA6NDL7 271 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 C17orf51A8MQB3 221 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 RGS11O94810 467 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 LPLP06858 475 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 CCL7P80098 99 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 MFGE8Q08431 387 aaPredicted RBP16.16■□□□□ 0.18
CD40-201ENST00000372276 PLPPR5Q32ZL2 321 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 TMEM81Q6P7N7 255 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 NLRC3Q7RTR2 1065 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 UEVLDQ8IX04 471 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 UXS1Q8NBZ7 420 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 BEST4Q8NFU0 473 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 GPX8Q8TED1 209 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 SAP25Q8TEE9 199 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 ATOH1Q92858 354 aaPredicted RBP16.16■□□□□ 0.18
CD40-201ENST00000372276 SLC25A21Q9BQT8 299 aaPredicted RBP16.16■□□□□ 0.18
CD40-201ENST00000372276 C1orf198Q9H425 327 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 ATXN7L1Q9ULK2 861 aaPredicted RBP16.16■□□□□ 0.18
CD40-201ENST00000372276 EMC9Q9Y3B6 208 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 HDGFL3Q9Y3E1 203 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 B3GALT1Q9Y5Z6 326 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 ADAMTS9Q9P2N4 1935 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 TTC28Q96AY4 2481 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 PCNX3Q9H6A9 2034 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 LOC107986453A0A1B0GWG9 222 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 TUBAL3A6NHL2 446 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 TMEM200CA6NKL6 621 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 A6NL46 340 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 OR2A4O95047 310 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 ERCC1P07992 297 aaPredicted RBP16.16■□□□□ 0.18
CD40-201ENST00000372276 FGF5P12034 268 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 HLA-DOBP13765 273 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 LAP3P28838 519 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 HSD11B1P28845 292 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 DHPSP49366 369 aaPredicted RBP16.16■□□□□ 0.18
CD40-201ENST00000372276 PSMA6P60900 246 aaKnown RBP16.16■□□□□ 0.18
CD40-201ENST00000372276 RPS15P62841 145 aaKnown RBP16.16■□□□□ 0.18
CD40-201ENST00000372276 MPPED2Q15777 294 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 FAM189A2Q15884 450 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 GUSBP11Q6P575 273 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 LRFN4Q6PJG9 635 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.16■□□□□ 0.18
CD40-201ENST00000372276 SLC38A9Q8NBW4 561 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 ARL5BQ96KC2 179 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 OR2A7Q96R45 310 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 NUDT16L1Q9BRJ7 211 aaKnown RBP16.16■□□□□ 0.18
CD40-201ENST00000372276 UQCC2Q9BRT2 126 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 COL25A1Q9BXS0 654 aaPredicted RBP16.16■□□□□ 0.18
CD40-201ENST00000372276 DEFB126Q9BYW3 111 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 METTL17Q9H7H0 456 aaPredicted RBP16.16■□□□□ 0.18
CD40-201ENST00000372276 MGAT4CQ9UBM8 478 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 EIF3KQ9UBQ5 218 aaKnown RBP16.16■□□□□ 0.18
CD40-201ENST00000372276 SLC23A1Q9UHI7 598 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 FLVCR2Q9UPI3 526 aa16.16■□□□□ 0.18
CD40-201ENST00000372276 ARID1BQ8NFD5 2236 aaPredicted RBP16.15■□□□□ 0.18
CD40-201ENST00000372276 ASXL3Q9C0F0 2248 aa16.15■□□□□ 0.18
CD40-201ENST00000372276 H0YC42 278 aa16.15■□□□□ 0.18
CD40-201ENST00000372276 TLX3O43711 291 aaPredicted RBP16.15■□□□□ 0.18
CD40-201ENST00000372276 SLC22A5O76082 557 aa16.15■□□□□ 0.18
CD40-201ENST00000372276 IGHG1P01857 330 aa16.15■□□□□ 0.18
CD40-201ENST00000372276 MYF5P13349 255 aa16.15■□□□□ 0.18
CD40-201ENST00000372276 GTF2F2P13984 249 aa16.15■□□□□ 0.18
CD40-201ENST00000372276 RAD52P43351 418 aa16.15■□□□□ 0.18
CD40-201ENST00000372276 GSK3AP49840 483 aa16.15■□□□□ 0.18
CD40-201ENST00000372276 TRA2AQ13595 282 aaKnown RBP eCLIP16.15■□□□□ 0.18
CD40-201ENST00000372276 TMEM255AQ5JRV8 349 aa16.15■□□□□ 0.18
CD40-201ENST00000372276 GLYATL3Q5SZD4 288 aa16.15■□□□□ 0.18
CD40-201ENST00000372276 STPG1Q5TH74 334 aa16.15■□□□□ 0.18
CD40-201ENST00000372276 OR5M10Q6IEU7 315 aa16.15■□□□□ 0.18
CD40-201ENST00000372276 ZNF680Q8NEM1 530 aa16.15■□□□□ 0.18
CD40-201ENST00000372276 OR4C16Q8NGL9 310 aa16.15■□□□□ 0.18
CD40-201ENST00000372276 GCDHQ92947 438 aaPredicted RBP16.15■□□□□ 0.18
CD40-201ENST00000372276 MARVELD3Q96A59 401 aa16.15■□□□□ 0.18
CD40-201ENST00000372276 ZBTB8AQ96BR9 441 aa16.15■□□□□ 0.18
CD40-201ENST00000372276 CCDC74BQ96LY2 380 aa16.15■□□□□ 0.18
CD40-201ENST00000372276 SPSB2Q99619 263 aa16.15■□□□□ 0.18
CD40-201ENST00000372276 GINS4Q9BRT9 223 aa16.15■□□□□ 0.18
CD40-201ENST00000372276 MRPL13Q9BYD1 178 aaKnown RBP16.15■□□□□ 0.18
CD40-201ENST00000372276 MYOZ1Q9NP98 299 aaPredicted RBP16.15■□□□□ 0.18
CD40-201ENST00000372276 TAS2R4Q9NYW5 299 aa16.15■□□□□ 0.18
CD40-201ENST00000372276 ZNF69Q9UC07 566 aa16.15■□□□□ 0.18
CD40-201ENST00000372276 RAB22AQ9UL26 194 aa16.15■□□□□ 0.18
CD40-201ENST00000372276 VDAC3Q9Y277 283 aa16.15■□□□□ 0.18
CD40-201ENST00000372276 MUC3AQ02505 3323 aa16.14■□□□□ 0.18
CD40-201ENST00000372276 A0A1W2PQM1 296 aa16.14■□□□□ 0.17
CD40-201ENST00000372276 BDP1A6H8Y1 2624 aa16.14■□□□□ 0.17
CD40-201ENST00000372276 LINC00862A6NCI5 91 aa16.14■□□□□ 0.17
CD40-201ENST00000372276 LDLRAD4O15165 306 aa16.14■□□□□ 0.17
CD40-201ENST00000372276 SIGLEC6O43699 453 aa16.14■□□□□ 0.17
CD40-201ENST00000372276 WISP1O95388 367 aa16.14■□□□□ 0.17
CD40-201ENST00000372276 WNT11O96014 354 aa16.14■□□□□ 0.17
CD40-201ENST00000372276 TMIGD3P0DMS9 266 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms