RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 PGAM4Q8N0Y7 254 aa16.11■□□□□ 0.17
TMEM53-201ENST00000372235 CLDN22Q8N7P3 220 aa16.11■□□□□ 0.17
TMEM53-201ENST00000372235 SLC25A40Q8TBP6 338 aa16.11■□□□□ 0.17
TMEM53-201ENST00000372235 TMEM186Q96B77 213 aa16.11■□□□□ 0.17
TMEM53-201ENST00000372235 PYURFQ96I23 114 aa16.11■□□□□ 0.17
TMEM53-201ENST00000372235 RSRC1Q96IZ7 334 aaKnown RBP16.11■□□□□ 0.17
TMEM53-201ENST00000372235 C7orf34Q96L11 122 aa16.11■□□□□ 0.17
TMEM53-201ENST00000372235 DHRS1Q96LJ7 313 aa16.11■□□□□ 0.17
TMEM53-201ENST00000372235 Q96M85 177 aa16.11■□□□□ 0.17
TMEM53-201ENST00000372235 LRRC37BQ96QE4 947 aa16.11■□□□□ 0.17
TMEM53-201ENST00000372235 DCLRE1CQ96SD1 692 aaKnown RBP16.11■□□□□ 0.17
TMEM53-201ENST00000372235 OR2J1Q9GZK6 312 aa16.11■□□□□ 0.17
TMEM53-201ENST00000372235 VSX1Q9NZR4 365 aaPredicted RBP16.11■□□□□ 0.17
TMEM53-201ENST00000372235 ATPIF1Q9UII2 106 aa16.11■□□□□ 0.17
TMEM53-201ENST00000372235 ADAM18Q9Y3Q7 739 aa16.11■□□□□ 0.17
TMEM53-201ENST00000372235 TRAV20A0A0B4J274 112 aa16.1■□□□□ 0.17
TMEM53-201ENST00000372235 UNC119BA6NIH7 251 aa16.1■□□□□ 0.17
TMEM53-201ENST00000372235 IMPA2O14732 288 aa16.1■□□□□ 0.17
TMEM53-201ENST00000372235 DOK2O60496 412 aa16.1■□□□□ 0.17
TMEM53-201ENST00000372235 GADD45GO95257 159 aa16.1■□□□□ 0.17
TMEM53-201ENST00000372235 GAAP10253 952 aa16.1■□□□□ 0.17
TMEM53-201ENST00000372235 TNFSF4P23510 183 aa16.1■□□□□ 0.17
TMEM53-201ENST00000372235 RGS6P49758 472 aa16.1■□□□□ 0.17
TMEM53-201ENST00000372235 MMP15P51511 669 aa16.1■□□□□ 0.17
TMEM53-201ENST00000372235 ACSM5Q6NUN0 579 aa16.1■□□□□ 0.17
TMEM53-201ENST00000372235 SMARCD3Q6STE5 483 aa16.1■□□□□ 0.17
TMEM53-201ENST00000372235 C16orf89Q6UX73 402 aa16.1■□□□□ 0.17
TMEM53-201ENST00000372235 USP51Q70EK9 711 aa16.1■□□□□ 0.17
TMEM53-201ENST00000372235 MEX3DQ86XN8 651 aaKnown RBP16.1■□□□□ 0.17
TMEM53-201ENST00000372235 ARL2BPQ9Y2Y0 163 aa16.1■□□□□ 0.17
TMEM53-201ENST00000372235 SLC16A7O60669 478 aa16.09■□□□□ 0.17
TMEM53-201ENST00000372235 TXNDC12O95881 172 aa16.09■□□□□ 0.17
TMEM53-201ENST00000372235 HTR5AP47898 357 aa16.09■□□□□ 0.17
TMEM53-201ENST00000372235 TSTQ16762 297 aaKnown RBP16.09■□□□□ 0.17
TMEM53-201ENST00000372235 MTX3Q5HYI7 312 aa16.09■□□□□ 0.17
TMEM53-201ENST00000372235 TSEN54Q7Z6J9 526 aaKnown RBP16.09■□□□□ 0.17
TMEM53-201ENST00000372235 OR5L1Q8NGL2 311 aa16.09■□□□□ 0.17
TMEM53-201ENST00000372235 POP5Q969H6 163 aaKnown RBP16.09■□□□□ 0.17
TMEM53-201ENST00000372235 NSMCE2Q96MF7 247 aa16.09■□□□□ 0.17
TMEM53-201ENST00000372235 SYT4Q9H2B2 425 aa16.09■□□□□ 0.17
TMEM53-201ENST00000372235 HIF1ANQ9NWT6 349 aa16.09■□□□□ 0.17
TMEM53-201ENST00000372235 PLEK2Q9NYT0 353 aa16.09■□□□□ 0.17
TMEM53-201ENST00000372235 TAGLN3Q9UI15 199 aa16.09■□□□□ 0.17
TMEM53-201ENST00000372235 METRNQ9UJH8 293 aa16.09■□□□□ 0.17
TMEM53-201ENST00000372235 TMCC3Q9ULS5 477 aa16.09■□□□□ 0.17
TMEM53-201ENST00000372235 MALRD1Q5VYJ5 2156 aa16.09■□□□□ 0.17
TMEM53-201ENST00000372235 RTTNQ86VV8 2226 aa16.09■□□□□ 0.17
TMEM53-201ENST00000372235 ANK3Q12955 4377 aaKnown RBP16.08■□□□□ 0.16
TMEM53-201ENST00000372235 H7C1C5 153 aa16.08■□□□□ 0.16
TMEM53-201ENST00000372235 SURF4O15260 269 aa16.08■□□□□ 0.16
TMEM53-201ENST00000372235 SPRY3O43610 288 aa16.08■□□□□ 0.16
TMEM53-201ENST00000372235 TCF21O43680 179 aa16.08■□□□□ 0.16
TMEM53-201ENST00000372235 TIMM8AO60220 97 aaPredicted RBP16.08■□□□□ 0.16
TMEM53-201ENST00000372235 CDC14BO60729 498 aa16.08■□□□□ 0.16
TMEM53-201ENST00000372235 IGHV1-46P01743 117 aa16.08■□□□□ 0.16
TMEM53-201ENST00000372235 CD55P08174 381 aa16.08■□□□□ 0.16
TMEM53-201ENST00000372235 TNFRSF1AP19438 455 aa16.08■□□□□ 0.16
TMEM53-201ENST00000372235 FUT4P22083 530 aa16.08■□□□□ 0.16
TMEM53-201ENST00000372235 SLC6A6P31641 620 aa16.08■□□□□ 0.16
TMEM53-201ENST00000372235 LCN6P62502 163 aa16.08■□□□□ 0.16
TMEM53-201ENST00000372235 GLO1Q04760 184 aa16.08■□□□□ 0.16
TMEM53-201ENST00000372235 SPATA46Q5T0L3 261 aa16.08■□□□□ 0.16
TMEM53-201ENST00000372235 SHQ1Q6PI26 577 aaKnown RBP16.08■□□□□ 0.16
TMEM53-201ENST00000372235 IL17RELQ6ZVW7 336 aa16.08■□□□□ 0.16
TMEM53-201ENST00000372235 RFPL4BQ6ZWI9 263 aa16.08■□□□□ 0.16
TMEM53-201ENST00000372235 PHC2Q8IXK0 858 aa16.08■□□□□ 0.16
TMEM53-201ENST00000372235 LINC00471Q8N535 108 aa16.08■□□□□ 0.16
TMEM53-201ENST00000372235 GJC3Q8NFK1 279 aa16.08■□□□□ 0.16
TMEM53-201ENST00000372235 REPIN1Q9BWE0 567 aaKnown RBP16.08■□□□□ 0.16
TMEM53-201ENST00000372235 NARFLQ9H6Q4 476 aa16.08■□□□□ 0.16
TMEM53-201ENST00000372235 ZNF665Q9H7R5 613 aa16.08■□□□□ 0.16
TMEM53-201ENST00000372235 IER3IP1Q9Y5U9 82 aa16.08■□□□□ 0.16
TMEM53-201ENST00000372235 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.08■□□□□ 0.16
TMEM53-201ENST00000372235 A0A0A6YYJ9 748 aa16.07■□□□□ 0.16
TMEM53-201ENST00000372235 OR6C6A6NF89 314 aa16.07■□□□□ 0.16
TMEM53-201ENST00000372235 ARPC3O15145 178 aa16.07■□□□□ 0.16
TMEM53-201ENST00000372235 IDH3BO43837 385 aa16.07■□□□□ 0.16
TMEM53-201ENST00000372235 KRT36O76013 467 aa16.07■□□□□ 0.16
TMEM53-201ENST00000372235 RENP00797 406 aa16.07■□□□□ 0.16
TMEM53-201ENST00000372235 FABP3P05413 133 aa16.07■□□□□ 0.16
TMEM53-201ENST00000372235 CTLA4P16410 223 aa16.07■□□□□ 0.16
TMEM53-201ENST00000372235 GATA3P23771 443 aa16.07■□□□□ 0.16
TMEM53-201ENST00000372235 MPV17P39210 176 aa16.07■□□□□ 0.16
TMEM53-201ENST00000372235 LMO4P61968 165 aa16.07■□□□□ 0.16
TMEM53-201ENST00000372235 SPIBQ01892 262 aa16.07■□□□□ 0.16
TMEM53-201ENST00000372235 KCNMB1Q16558 191 aa16.07■□□□□ 0.16
TMEM53-201ENST00000372235 VASH1Q7L8A9 365 aaPredicted RBP16.07■□□□□ 0.16
TMEM53-201ENST00000372235 JAZF1Q86VZ6 243 aa16.07■□□□□ 0.16
TMEM53-201ENST00000372235 OR52J3Q8NH60 311 aa16.07■□□□□ 0.16
TMEM53-201ENST00000372235 CCL17Q92583 94 aa16.07■□□□□ 0.16
TMEM53-201ENST00000372235 PTP4A1Q93096 173 aa16.07■□□□□ 0.16
TMEM53-201ENST00000372235 RASD2Q96D21 266 aa16.07■□□□□ 0.16
TMEM53-201ENST00000372235 RERGLQ9H628 205 aa16.07■□□□□ 0.16
TMEM53-201ENST00000372235 EMC7Q9NPA0 242 aa16.07■□□□□ 0.16
TMEM53-201ENST00000372235 TREM2Q9NZC2 230 aa16.07■□□□□ 0.16
TMEM53-201ENST00000372235 KLHL21Q9UJP4 597 aa16.07■□□□□ 0.16
TMEM53-201ENST00000372235 POLR1DQ9Y2S0 133 aa16.07■□□□□ 0.16
TMEM53-201ENST00000372235 TRBV4-1A0A0J9YWV2 114 aa16.06■□□□□ 0.16
TMEM53-201ENST00000372235 SOCS2O14508 198 aa16.06■□□□□ 0.16
TMEM53-201ENST00000372235 OR10H3O60404 316 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms