RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 GTF2F2P13984 249 aa16.4■□□□□ 0.22
SHKBP1-201ENST00000291842 GNG2P59768 71 aa16.4■□□□□ 0.22
SHKBP1-201ENST00000291842 ZP4Q12836 540 aa16.4■□□□□ 0.22
SHKBP1-201ENST00000291842 HLA-BQ31612 363 aa16.4■□□□□ 0.22
SHKBP1-201ENST00000291842 DNM1P46Q6ZS02 220 aa16.4■□□□□ 0.22
SHKBP1-201ENST00000291842 ZNF627Q7L945 461 aa16.4■□□□□ 0.22
SHKBP1-201ENST00000291842 JAGN1Q8N5M9 183 aa16.4■□□□□ 0.22
SHKBP1-201ENST00000291842 MEIOBQ8N635 442 aa16.4■□□□□ 0.22
SHKBP1-201ENST00000291842 SAP25Q8TEE9 199 aa16.4■□□□□ 0.22
SHKBP1-201ENST00000291842 SLC25A28Q96A46 364 aa16.4■□□□□ 0.22
SHKBP1-201ENST00000291842 DUSP23Q9BVJ7 150 aa16.4■□□□□ 0.22
SHKBP1-201ENST00000291842 SERINC1Q9NRX5 453 aa16.4■□□□□ 0.22
SHKBP1-201ENST00000291842 FBXL2Q9UKC9 423 aa16.4■□□□□ 0.22
SHKBP1-201ENST00000291842 HTR2CP28335 458 aa16.39■□□□□ 0.21
SHKBP1-201ENST00000291842 PTGDSP41222 190 aa16.39■□□□□ 0.21
SHKBP1-201ENST00000291842 SCAND1P57086 179 aa16.39■□□□□ 0.21
SHKBP1-201ENST00000291842 SNTA1Q13424 505 aa16.39■□□□□ 0.21
SHKBP1-201ENST00000291842 ZNF385CQ66K41 422 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-201ENST00000291842 GLT8D1Q68CQ7 371 aa16.39■□□□□ 0.21
SHKBP1-201ENST00000291842 FAM166AQ6J272 317 aa16.39■□□□□ 0.21
SHKBP1-201ENST00000291842 DNM1P34Q6PK57 102 aa16.39■□□□□ 0.21
SHKBP1-201ENST00000291842 GPAT4Q86UL3 456 aa16.39■□□□□ 0.21
SHKBP1-201ENST00000291842 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-201ENST00000291842 POC1BQ8TC44 478 aa16.39■□□□□ 0.21
SHKBP1-201ENST00000291842 GINS4Q9BRT9 223 aa16.39■□□□□ 0.21
SHKBP1-201ENST00000291842 NPDC1Q9NQX5 325 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-201ENST00000291842 PRMT8Q9NR22 394 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-201ENST00000291842 ELF5Q9UKW6 265 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-201ENST00000291842 HHLA2Q9UM44 414 aa16.39■□□□□ 0.21
SHKBP1-201ENST00000291842 RLN1P04808 185 aa16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 H2BFMP0C1H6 154 aa16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 IGFBP3P17936 291 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 MFSD13AQ14CX5 517 aa16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 ZBTB37Q5TC79 503 aa16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 TEX261Q6UWH6 196 aa16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 SEZ6L2Q6UXD5 910 aa16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 PPP1R3BQ86XI6 285 aa16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 OR5L2Q8NGL0 311 aa16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 C11orf40Q8WZ69 217 aa16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 THRSPQ92748 146 aa16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 CMKLR1Q99788 373 aa16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 DPCDQ9BVM2 203 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 U3KQ87 197 aa16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 A0A1W2PQ72 361 aa16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 ZNF208O43345 1280 aa16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 ZFAND5O76080 213 aa16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 CD3DP04234 171 aa16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 VSIG10L2P0DP72 767 aa16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 PRSS3P35030 304 aa16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 SUMO3P55854 103 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 UBE2MP61081 183 aaKnown RBP16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 CSRP2Q16527 193 aa16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 PLPPR5Q32ZL2 321 aa16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 OR51S1Q8NGJ8 323 aa16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 HEXA-AS1Q9H8Q6 139 aa16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 B3GAT1Q9P2W7 334 aa16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 PPIEQ9UNP9 301 aaKnown RBP16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 NPTNQ9Y639 398 aa16.38■□□□□ 0.21
SHKBP1-201ENST00000291842 CELA2AP08217 269 aa16.37■□□□□ 0.21
SHKBP1-201ENST00000291842 PRAMEF20Q5VT98 475 aa16.37■□□□□ 0.21
SHKBP1-201ENST00000291842 CARD17Q5XLA6 110 aa16.37■□□□□ 0.21
SHKBP1-201ENST00000291842 THOC7Q6I9Y2 204 aaKnown RBP16.37■□□□□ 0.21
SHKBP1-201ENST00000291842 PCNPQ8WW12 178 aaKnown RBP16.37■□□□□ 0.21
SHKBP1-201ENST00000291842 EMC3Q9P0I2 261 aa16.37■□□□□ 0.21
SHKBP1-201ENST00000291842 WIF1Q9Y5W5 379 aa16.37■□□□□ 0.21
SHKBP1-201ENST00000291842 A0A1W2PPL8 197 aa16.37■□□□□ 0.21
SHKBP1-201ENST00000291842 MEN1O00255 615 aa16.37■□□□□ 0.21
SHKBP1-201ENST00000291842 CREBL2O60519 120 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-201ENST00000291842 TPOP07202 933 aa16.37■□□□□ 0.21
SHKBP1-201ENST00000291842 PNLIPP16233 465 aa16.37■□□□□ 0.21
SHKBP1-201ENST00000291842 SFTPDP35247 375 aa16.37■□□□□ 0.21
SHKBP1-201ENST00000291842 NHLRC1Q6VVB1 395 aa16.37■□□□□ 0.21
SHKBP1-201ENST00000291842 OR8H3Q8N146 312 aa16.37■□□□□ 0.21
SHKBP1-201ENST00000291842 FTMTQ8N4E7 242 aa16.37■□□□□ 0.21
SHKBP1-201ENST00000291842 UXS1Q8NBZ7 420 aa16.37■□□□□ 0.21
SHKBP1-201ENST00000291842 ZNF680Q8NEM1 530 aa16.37■□□□□ 0.21
SHKBP1-201ENST00000291842 OR6S1Q8NH40 331 aa16.37■□□□□ 0.21
SHKBP1-201ENST00000291842 TTC9Q92623 222 aa16.37■□□□□ 0.21
SHKBP1-201ENST00000291842 NKD1Q969G9 470 aa16.37■□□□□ 0.21
SHKBP1-201ENST00000291842 PRO3102Q9H379 93 aa16.37■□□□□ 0.21
SHKBP1-201ENST00000291842 ALKBH4Q9NXW9 302 aa16.37■□□□□ 0.21
SHKBP1-201ENST00000291842 ZNF814B7Z6K7 855 aa16.36■□□□□ 0.21
SHKBP1-201ENST00000291842 CSF1P09603 554 aa16.36■□□□□ 0.21
SHKBP1-201ENST00000291842 KLK2P20151 261 aa16.36■□□□□ 0.21
SHKBP1-201ENST00000291842 CFPP27918 469 aa16.36■□□□□ 0.21
SHKBP1-201ENST00000291842 CDAP32320 146 aa16.36■□□□□ 0.21
SHKBP1-201ENST00000291842 FAUP35544 74 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-201ENST00000291842 PSMA6P60900 246 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-201ENST00000291842 OR10H5Q8NGA6 315 aa16.36■□□□□ 0.21
SHKBP1-201ENST00000291842 FGGYQ96C11 551 aa16.36■□□□□ 0.21
SHKBP1-201ENST00000291842 OR5B2Q96R09 309 aa16.36■□□□□ 0.21
SHKBP1-201ENST00000291842 DEFB126Q9BYW3 111 aa16.36■□□□□ 0.21
SHKBP1-201ENST00000291842 SEC61A2Q9H9S3 476 aa16.36■□□□□ 0.21
SHKBP1-201ENST00000291842 B3GALT5Q9Y2C3 310 aa16.36■□□□□ 0.21
SHKBP1-201ENST00000291842 MPC2O95563 127 aa16.36■□□□□ 0.21
SHKBP1-201ENST00000291842 CFIP05156 583 aa16.36■□□□□ 0.21
SHKBP1-201ENST00000291842 TSPAN5P62079 268 aa16.36■□□□□ 0.21
SHKBP1-201ENST00000291842 OC90Q02509 493 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-201ENST00000291842 MFAP5Q13361 173 aa16.36■□□□□ 0.21
SHKBP1-201ENST00000291842 RBMS2Q15434 407 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms