RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 SMCO3A2RU48 225 aa15.17■□□□□ 0.02
PHRF1-201ENST00000264555 CLDN20P56880 219 aa15.17■□□□□ 0.02
PHRF1-201ENST00000264555 FAM27D1Q5T7N8 215 aa15.17■□□□□ 0.02
PHRF1-201ENST00000264555 YRDCQ86U90 279 aaKnown RBP15.17■□□□□ 0.02
PHRF1-201ENST00000264555 OR1L3Q8NH93 324 aa15.17■□□□□ 0.02
PHRF1-201ENST00000264555 FAM60AQ9NP50 221 aa15.17■□□□□ 0.02
PHRF1-201ENST00000264555 DNAJB11Q9UBS4 358 aa15.17■□□□□ 0.02
PHRF1-201ENST00000264555 LHX6Q9UPM6 363 aa15.17■□□□□ 0.02
PHRF1-201ENST00000264555 LOC285556D6RIA3 1793 aa15.17■□□□□ 0.02
PHRF1-201ENST00000264555 FITM1A5D6W6 292 aa15.16■□□□□ 0.02
PHRF1-201ENST00000264555 STK17BO94768 372 aa15.16■□□□□ 0.02
PHRF1-201ENST00000264555 PMP2P02689 132 aa15.16■□□□□ 0.02
PHRF1-201ENST00000264555 CT62P0C5K7 136 aa15.16■□□□□ 0.02
PHRF1-201ENST00000264555 FAM109AQ8N4B1 249 aa15.16■□□□□ 0.02
PHRF1-201ENST00000264555 VN1R1Q9GZP7 353 aa15.16■□□□□ 0.02
PHRF1-201ENST00000264555 SLC22A13Q9Y226 551 aa15.16■□□□□ 0.02
PHRF1-201ENST00000264555 A0A0B4J203 849 aa15.16■□□□□ 0.02
PHRF1-201ENST00000264555 ANXA7P20073 488 aaKnown RBP15.16■□□□□ 0.02
PHRF1-201ENST00000264555 BCL2A1Q16548 175 aa15.16■□□□□ 0.02
PHRF1-201ENST00000264555 BEX5Q5H9J7 111 aa15.16■□□□□ 0.02
PHRF1-201ENST00000264555 WDFY2Q96P53 400 aa15.16■□□□□ 0.02
PHRF1-201ENST00000264555 CD300LBA8K4G0 201 aa15.16■□□□□ 0.02
PHRF1-201ENST00000264555 RAB11FIP2Q7L804 512 aa15.16■□□□□ 0.02
PHRF1-201ENST00000264555 OR1J2Q8NGS2 313 aa15.16■□□□□ 0.02
PHRF1-201ENST00000264555 ARL5BQ96KC2 179 aa15.16■□□□□ 0.02
PHRF1-201ENST00000264555 PLPP2O43688 288 aa15.16■□□□□ 0.02
PHRF1-201ENST00000264555 PPP1CAP62136 330 aa15.16■□□□□ 0.02
PHRF1-201ENST00000264555 ZNF117Q03924 483 aa15.16■□□□□ 0.02
PHRF1-201ENST00000264555 FOXF1Q12946 379 aa15.16■□□□□ 0.02
PHRF1-201ENST00000264555 HLA-BQ31612 363 aa15.16■□□□□ 0.02
PHRF1-201ENST00000264555 SLC25A35Q3KQZ1 300 aa15.16■□□□□ 0.02
PHRF1-201ENST00000264555 BTLAQ7Z6A9 289 aa15.16■□□□□ 0.02
PHRF1-201ENST00000264555 ZCCHC4Q9H5U6 513 aa15.16■□□□□ 0.02
PHRF1-201ENST00000264555 COPS3Q9UNS2 423 aa15.16■□□□□ 0.02
PHRF1-201ENST00000264555 HDGFL3Q9Y3E1 203 aa15.16■□□□□ 0.02
PHRF1-201ENST00000264555 CNTRLQ7Z7A1 2325 aa15.16■□□□□ 0.02
PHRF1-201ENST00000264555 DOCK3Q8IZD9 2030 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 TMEM200CA6NKL6 621 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 MBTPS2O43462 519 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 ECI1P42126 302 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 NXPH1P58417 271 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 RBM39Q14498 530 aaKnown RBP15.15■□□□□ 0.02
PHRF1-201ENST00000264555 HRH3Q9Y5N1 445 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 IKZF1Q13422 519 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 C2orf76Q3KRA6 126 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 AADACL4Q5VUY2 407 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 TIGD3Q6B0B8 471 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 OR4D11Q8NGI4 311 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 LIPHQ8WWY8 451 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 POFUT1Q9H488 388 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 MESP2Q0VG99 397 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 ALKAL2Q6UX46 152 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 OR8D4Q8NGM9 314 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 SLC25A31Q9H0C2 315 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 ING1Q9UK53 422 aaPredicted RBP15.15■□□□□ 0.02
PHRF1-201ENST00000264555 APEHP13798 732 aaKnown RBP15.15■□□□□ 0.02
PHRF1-201ENST00000264555 SPRED2Q7Z698 418 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 MFSD4AQ8N468 514 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 DEFB123Q8N688 67 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 OR9K2Q8NGE7 335 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 OIT3Q8WWZ8 545 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 TAAR8Q969N4 342 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 SPACA9Q96E40 222 aaPredicted RBP15.15■□□□□ 0.02
PHRF1-201ENST00000264555 CCDC86Q9H6F5 360 aaKnown RBP15.15■□□□□ 0.02
PHRF1-201ENST00000264555 HRASLSQ9HDD0 168 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 CYSLTR2Q9NS75 346 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 PLXNA1Q9UIW2 1896 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 PLSCR5A0PG75 271 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 CDC42EP2O14613 210 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 FOLR1P15328 257 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 IL32P24001 234 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 S100A11P31949 105 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 RPL23AP62750 156 aaKnown RBP15.15■□□□□ 0.02
PHRF1-201ENST00000264555 OTOSQ8NHW6 89 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 ABHD6Q9BV23 337 aa15.15■□□□□ 0.02
PHRF1-201ENST00000264555 A0A1B0GV50 99 aa15.14■□□□□ 0.01
PHRF1-201ENST00000264555 ABOP16442 354 aa15.14■□□□□ 0.01
PHRF1-201ENST00000264555 TGM1P22735 817 aa15.14■□□□□ 0.01
PHRF1-201ENST00000264555 LPCAT3Q6P1A2 487 aa15.14■□□□□ 0.01
PHRF1-201ENST00000264555 PRSS35Q8N3Z0 413 aa15.14■□□□□ 0.01
PHRF1-201ENST00000264555 FAM71CQ8NEG0 241 aa15.14■□□□□ 0.01
PHRF1-201ENST00000264555 MIA3Q5JRA6 1907 aa15.14■□□□□ 0.01
PHRF1-201ENST00000264555 A0A0A6YYJ9 748 aa15.14■□□□□ 0.01
PHRF1-201ENST00000264555 CRYZL1O95825 349 aa15.14■□□□□ 0.01
PHRF1-201ENST00000264555 MDGA2Q7Z553 956 aa15.14■□□□□ 0.01
PHRF1-201ENST00000264555 OR5H6Q8NGV6 325 aa15.14■□□□□ 0.01
PHRF1-201ENST00000264555 KCNE4Q8WWG9 221 aa15.14■□□□□ 0.01
PHRF1-201ENST00000264555 APH1AQ96BI3 265 aa15.14■□□□□ 0.01
PHRF1-201ENST00000264555 FJX1Q86VR8 437 aa15.14■□□□□ 0.01
PHRF1-201ENST00000264555 DND1Q8IYX4 353 aaKnown RBP15.14■□□□□ 0.01
PHRF1-201ENST00000264555 PAQR8Q8TEZ7 354 aa15.14■□□□□ 0.01
PHRF1-201ENST00000264555 PRELID1Q9Y255 219 aa15.14■□□□□ 0.01
PHRF1-201ENST00000264555 NUP214P35658 2090 aaPredicted RBP15.14■□□□□ 0.01
PHRF1-201ENST00000264555 BET1O15155 118 aa15.14■□□□□ 0.01
PHRF1-201ENST00000264555 EML2O95834 649 aa15.14■□□□□ 0.01
PHRF1-201ENST00000264555 GIPP09681 153 aaPredicted RBP15.14■□□□□ 0.01
PHRF1-201ENST00000264555 ZNF728P0DKX0 622 aa15.14■□□□□ 0.01
PHRF1-201ENST00000264555 MMP15P51511 669 aa15.14■□□□□ 0.01
PHRF1-201ENST00000264555 RNLSQ5VYX0 342 aa15.14■□□□□ 0.01
PHRF1-201ENST00000264555 GABRG1Q8N1C3 465 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms