RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 F5P12259 2224 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 PRRT4C9JH25 899 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 JTBO76095 146 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 UTS2O95399 124 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 NMBP08949 121 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 BLVRBP30043 206 aaPredicted RBP13.33□□□□□ -0.28
VPS36-207ENST00000611132 GPR85P60893 370 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 MELKQ14680 651 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 EEF1A1P5Q5VTE0 462 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 ANKRD16Q6P6B7 361 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 OR11A1Q9GZK7 315 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 SIRT4Q9Y6E7 314 aaPredicted RBP13.33□□□□□ -0.28
VPS36-207ENST00000611132 A0A0B4J293 547 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 A0A0B4J2E0 115 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 PIGBOS1A0A0B4J2F0 54 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 A0A1B0GX12 115 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 OLFM2O95897 454 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 HEXBP07686 556 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 FOSL2P15408 326 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 AVPR2P30518 371 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 DHRS2Q13268 280 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 RUNX2Q13950 521 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 UBXN2BQ14CS0 331 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 Q6ZRG5 221 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 TSEN54Q7Z6J9 526 aaKnown RBP13.33□□□□□ -0.28
VPS36-207ENST00000611132 STPG2Q8N412 459 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 SLC22A11Q9NSA0 550 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 LRIT1Q9P2V4 623 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 BHLHE40O14503 412 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 MEOX2P50222 304 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 EMDP50402 254 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 RPL18Q07020 188 aaKnown RBP13.32□□□□□ -0.28
VPS36-207ENST00000611132 Q6ZSR6 202 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 OR1S2Q8NGQ3 325 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 RHOFQ9HBH0 211 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 SPACA1Q9HBV2 294 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 NEUROG3Q9Y4Z2 214 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 IDSB3KWA1 339 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 PPP1R2P9O14990 202 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 AGFG1P52594 562 aaKnown RBP13.32□□□□□ -0.28
VPS36-207ENST00000611132 ACY1Q03154 408 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 SLC17A1Q14916 467 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 SSX2Q16385 188 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 DCXRQ7Z4W1 244 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 SLC25A31Q9H0C2 315 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 FGF22Q9HCT0 170 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 KCNG2Q9UJ96 466 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 ING1Q9UK53 422 aaPredicted RBP13.32□□□□□ -0.28
VPS36-207ENST00000611132 ZNF346Q9UL40 294 aaKnown RBP13.32□□□□□ -0.28
VPS36-207ENST00000611132 ZNF98A6NK75 572 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 EIF2S3P41091 472 aaKnown RBP13.32□□□□□ -0.28
VPS36-207ENST00000611132 RABIFP47224 123 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 OR2B8PP59922 312 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 RPL27P61353 136 aaKnown RBP13.32□□□□□ -0.28
VPS36-207ENST00000611132 MANEAQ5SRI9 462 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 OPN5Q6U736 354 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 GLIPR1L1Q6UWM5 242 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 OVCH2Q7RTZ1 564 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 ARIH2OSQ8N7S6 290 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 OR9K2Q8NGE7 335 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 CCDC74AQ96AQ1 378 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 TMPRSS13Q9BYE2 586 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 PURGQ9UJV8 347 aaKnown RBP13.32□□□□□ -0.28
VPS36-207ENST00000611132 TRAV20A0A0B4J274 112 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 HCRTR1O43613 425 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 HYAL3O43820 417 aaPredicted RBP13.32□□□□□ -0.28
VPS36-207ENST00000611132 ITGB8P26012 769 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 GJA4P35212 333 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 POLR2HP52434 150 aaKnown RBP13.32□□□□□ -0.28
VPS36-207ENST00000611132 CRYBA2P53672 197 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 LAMTOR1Q6IAA8 161 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 IL34Q6ZMJ4 242 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 MCEMP1Q8IX19 187 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 RCBTB1Q8NDN9 531 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 MARCH1Q8TCQ1 289 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 GLYATL2Q8WU03 294 aa13.32□□□□□ -0.28
VPS36-207ENST00000611132 GPR31O00270 319 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 ARPC3O15145 178 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 HRH1P35367 487 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 SCAND1P57086 179 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 DCAF7P61962 342 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 SKA3Q8IX90 412 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 FGF13Q92913 245 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 NPAS1Q99742 590 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 FN3KRPQ9HA64 309 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 ZNF275Q9NSD4 429 aaPredicted RBP13.31□□□□□ -0.28
VPS36-207ENST00000611132 SLCO1C1Q9NYB5 712 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 COA3Q9Y2R0 106 aaPredicted RBP13.31□□□□□ -0.28
VPS36-207ENST00000611132 TMED7-TICAM2A0A0A6YYA0 188 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 ZNF705GA8MUZ8 300 aaPredicted RBP13.31□□□□□ -0.28
VPS36-207ENST00000611132 CXCL2P19875 107 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 TBPP20226 339 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 F2RL1P55085 397 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 ZNF547Q8IVP9 402 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 HAS2Q92819 552 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 BORCS8Q96FH0 119 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 CA10Q9NS85 328 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 TBC1D29Q9UFV1 150 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 TMED7Q9Y3B3 224 aa13.31□□□□□ -0.28
VPS36-207ENST00000611132 TCRBV21S2A2A0A5A6 115 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms