RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 AGPAT4Q9NRZ5 378 aa4.01□□□□□ -1.77
LINC00458-206ENST00000607494 CLCF1Q9UBD9 225 aa4.01□□□□□ -1.77
LINC00458-206ENST00000607494 MOKQ9UQ07 419 aa4.01□□□□□ -1.77
LINC00458-206ENST00000607494 ALKQ9UM73 1620 aa4.01□□□□□ -1.77
LINC00458-206ENST00000607494 PHF3Q92576 2039 aaKnown RBP4□□□□□ -1.77
LINC00458-206ENST00000607494 ZNF142P52746 1687 aaPredicted RBP4□□□□□ -1.77
LINC00458-206ENST00000607494 TCOF1Q13428 1488 aaKnown RBP4□□□□□ -1.77
LINC00458-206ENST00000607494 ZNF518AQ6AHZ1 1483 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 MYO3AQ8NEV4 1616 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 RLFQ13129 1914 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 TRAV6A0A075B6T7 132 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 IGKV1D-13A0A0B4J2D9 117 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 PRSS37A4D1T9 235 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 F6UB75 175 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 PSMD11O00231 422 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 POLR1CO15160 346 aaPredicted RBP4□□□□□ -1.77
LINC00458-206ENST00000607494 HSBP1O75506 76 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 FARS2O95363 451 aaKnown RBP4□□□□□ -1.77
LINC00458-206ENST00000607494 TIMP1P01033 207 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 IGKV1-13P0DP09 117 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 PSMB1P20618 241 aaKnown RBP4□□□□□ -1.77
LINC00458-206ENST00000607494 NBL1P41271 181 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 GPR1P46091 355 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 RIPPLY3P57055 190 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 LCN2P80188 198 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 SLC25A11Q02978 314 aaKnown RBP4□□□□□ -1.77
LINC00458-206ENST00000607494 PSMD5Q16401 504 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 EOGTQ5NDL2 527 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 UTF1Q5T230 341 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 C11orf53Q8IXP5 236 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 DRAXINQ8NBI3 349 aaPredicted RBP4□□□□□ -1.77
LINC00458-206ENST00000607494 ZNF740Q8NDX6 193 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 FBXO36Q8NEA4 188 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 OR4A15Q8NGL6 344 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 OR13C9Q8NGT0 318 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 OR10R2Q8NGX6 335 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 TYMSOSQ8TAI1 123 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 NUBPLQ8TB37 319 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 C7orf33Q8WU49 177 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 SDR42E1Q8WUS8 393 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 ARPC1AQ92747 370 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 TMIGD2Q96BF3 282 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 SH3GL3Q99963 347 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 SRMSQ9H3Y6 488 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 ZNF275Q9NSD4 429 aaPredicted RBP4□□□□□ -1.77
LINC00458-206ENST00000607494 IFNKQ9P0W0 207 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 DDX19BQ9UMR2 479 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 RCL1Q9Y2P8 373 aaKnown RBP4□□□□□ -1.77
LINC00458-206ENST00000607494 SLC25A15Q9Y619 301 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 CDC42BPBQ9Y5S2 1711 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 MROH2AA6NES4 1674 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 ITSN2Q9NZM3 1697 aa4□□□□□ -1.77
LINC00458-206ENST00000607494 KIDINS220Q9ULH0 1771 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 COL22A1Q8NFW1 1626 aaPredicted RBP3.99□□□□□ -1.77
LINC00458-206ENST00000607494 THSD7BQ9C0I4 1608 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 MLH3Q9UHC1 1453 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 SUPT6HQ7KZ85 1726 aaKnown RBP3.99□□□□□ -1.77
LINC00458-206ENST00000607494 IGLV3-10A0A075B6K4 115 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 A0A0B4J2A0 478 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 A0A0G2JLM5 398 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 A0A1B0GW55 424 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 HBE1P02100 147 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 HSPB1P04792 205 aaKnown RBP3.99□□□□□ -1.77
LINC00458-206ENST00000607494 KRT16P08779 473 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 GIG44P09565 113 aaPredicted RBP3.99□□□□□ -1.77
LINC00458-206ENST00000607494 DUX4L2P0CJ85 424 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 DUX4L3P0CJ86 424 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 DUX4L4P0CJ87 422 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 DUX4L5P0CJ88 424 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 DUX4L6P0CJ89 424 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 DUX4L7P0CJ90 424 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 SERPINB5P36952 375 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 CFHR2P36980 270 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 APOC4P55056 127 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 SP4Q02446 784 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 ZNF33AQ06730 810 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 TWF1Q12792 350 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 SLAQ13239 276 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 GGTLC2Q14390 218 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 CLINT1Q14677 625 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 GPNMBQ14956 572 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 RPEL1Q2QD12 228 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 TRMT5Q32P41 509 aaKnown RBP3.99□□□□□ -1.77
LINC00458-206ENST00000607494 DUX4L9Q6RFH8 374 aaPredicted RBP3.99□□□□□ -1.77
LINC00458-206ENST00000607494 RFLNAQ6ZTI6 216 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 TMEM179BQ7Z7N9 219 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 FBXO16Q8IX29 292 aaPredicted RBP3.99□□□□□ -1.77
LINC00458-206ENST00000607494 GATSQ8NAP1 163 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 FANK1Q8TC84 345 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 FAM122AQ96E09 287 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 DEFB127Q9H1M4 99 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 NXF3Q9H4D5 531 aaKnown RBP3.99□□□□□ -1.77
LINC00458-206ENST00000607494 ACP6Q9NPH0 428 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 DUX4Q9UBX2 424 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 SHPKQ9UHJ6 478 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 FLVCR2Q9UPI3 526 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 VSIG4Q9Y279 399 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 YARS2Q9Y2Z4 477 aaKnown RBP3.99□□□□□ -1.77
LINC00458-206ENST00000607494 ARHGAP5Q13017 1502 aa3.99□□□□□ -1.77
LINC00458-206ENST00000607494 PLA2R1Q13018 1463 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms