RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 DDX28Q9NUL7 540 aaKnown RBP5.43□□□□□ -1.54
SDF2-205ENST00000587629 EGFL7Q9UHF1 273 aa5.43□□□□□ -1.54
SDF2-205ENST00000587629 MEGF8Q7Z7M0 2845 aa5.43□□□□□ -1.54
SDF2-205ENST00000587629 IGHV3OR16-10A0A075B7F0 116 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 A0A0G2JND7 137 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 TRAPPC2LH3BP13 241 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 H7C1C5 153 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 FBP2O00757 339 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 ZNF205O95201 554 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 SCG5P05408 212 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 IFI30P13284 250 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 FUT4P22083 530 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 RBM34P42696 430 aaKnown RBP5.42□□□□□ -1.54
SDF2-205ENST00000587629 LIMS1P48059 325 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 GZMMP51124 257 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 CTXN1P60606 82 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 SEC61A1P61619 476 aaKnown RBP5.42□□□□□ -1.54
SDF2-205ENST00000587629 LCN6P62502 163 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 TAF11Q15544 211 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 NRN1LQ496H8 165 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 ALG10Q5BKT4 473 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 TTMPQ5BVD1 217 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 FAM209AQ5JX71 171 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 FAM27BQ5VT28 67 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 MBNL2Q5VZF2 373 aaKnown RBP5.42□□□□□ -1.54
SDF2-205ENST00000587629 C1orf94Q6P1W5 598 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 SLC25A47Q6Q0C1 308 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 CCDC80Q76M96 950 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 HDDC2Q7Z4H3 204 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 JAZF1Q86VZ6 243 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 SLC30A8Q8IWU4 369 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 ALDH16A1Q8IZ83 802 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 OR2Z1Q8NG97 314 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 OR51A7Q8NH64 312 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 RASSF5Q8WWW0 418 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 DVL3Q92997 716 aaPredicted RBP5.42□□□□□ -1.54
SDF2-205ENST00000587629 NMD3Q96D46 503 aaKnown RBP5.42□□□□□ -1.54
SDF2-205ENST00000587629 TPD52L3Q96J77 140 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 ATP6V1G3Q96LB4 118 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 C4orf45Q96LM5 186 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 RBP7Q96R05 134 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 ECSITQ9BQ95 431 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 PCDHAC1Q9H158 963 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 TXNIPQ9H3M7 391 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 POFUT1Q9H488 388 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 EMC7Q9NPA0 242 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 INTS9Q9NV88 658 aaKnown RBP5.42□□□□□ -1.54
SDF2-205ENST00000587629 RHCGQ9UBD6 479 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 ZNF69Q9UC07 566 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 MED31Q9Y3C7 131 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 TIMM10BQ9Y5J6 103 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 NPTNQ9Y639 398 aa5.42□□□□□ -1.54
SDF2-205ENST00000587629 SOX21Q9Y651 276 aaPredicted RBP5.42□□□□□ -1.54
SDF2-205ENST00000587629 ARHGAP32A7KAX9 2087 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 TRAV27A0A087WT01 109 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 IGHV3-64DA0A0J9YX35 117 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 DNAJC9-AS1A6NH13 148 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 CENPBD1B2RD01 187 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 TMPRSS2O15393 492 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 OR5F1O95221 314 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 ABHD16AO95870 558 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 FSHBP01225 129 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 IGHV2-70P01814 119 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 VIMP08670 466 aaKnown RBP5.41□□□□□ -1.54
SDF2-205ENST00000587629 CST2P09228 141 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 GATA3P23771 443 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 GUCA1AP43080 201 aaPredicted RBP5.41□□□□□ -1.54
SDF2-205ENST00000587629 ARHGDIAP52565 204 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 ZNF133P52736 654 aaPredicted RBP5.41□□□□□ -1.54
SDF2-205ENST00000587629 RPL27P61353 136 aaKnown RBP5.41□□□□□ -1.54
SDF2-205ENST00000587629 PCBD1P61457 104 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 SLC3A1Q07837 685 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 PSG7Q13046 419 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 ZNF154Q13106 437 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 BAMBIQ13145 260 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 CYLC2Q14093 348 aaPredicted RBP5.41□□□□□ -1.54
SDF2-205ENST00000587629 ENDOGQ14249 297 aaKnown RBP5.41□□□□□ -1.54
SDF2-205ENST00000587629 ZMYND11Q15326 602 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 LINC01559Q495D7 138 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 LRRC23Q53EV4 343 aaPredicted RBP5.41□□□□□ -1.54
SDF2-205ENST00000587629 CYBRD1Q53TN4 286 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 ARMCX4Q5H9R4 360 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 MTX3Q5HYI7 312 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 UNQ6126/PRO20091Q6UXV3 157 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 Q6ZR03 302 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 OR5AS1Q8N127 324 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 KLHL36Q8N4N3 616 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 DEFB108BQ8NET1 73 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 C10orf82Q8WW14 230 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 ITLN1Q8WWA0 313 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 SLC7A6Q92536 515 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 LRRC58Q96CX6 371 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 CMBLQ96DG6 245 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 BPIFA2Q96DR5 249 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 RERGLQ9H628 205 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 SMURF2Q9HAU4 748 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 ELOVL3Q9HB03 270 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 NTN4Q9HB63 628 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 CYSLTR2Q9NS75 346 aa5.41□□□□□ -1.54
SDF2-205ENST00000587629 TMEM106BQ9NUM4 274 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms