RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 NPIPA2E9PIF3 369 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 RASGRF2O14827 1237 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 B4GALT2O60909 372 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 CA11O75493 328 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 BANF1O75531 89 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 AP2A1O95782 977 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 NUDT14O95848 222 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 IFNB1P01574 187 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 SERPINA7P05543 415 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 ANXA5P08758 320 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 HBQ1P09105 142 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 H2AFZP0C0S5 128 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 RALBP11234 206 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 PSG2P11465 335 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 ZNF24P17028 368 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 CD9P21926 228 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 RPA3P35244 121 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-219ENST00000556413 XCR1P46094 333 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 POU3F4P49335 361 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 ARHGDIBP52566 201 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 GEMP55040 296 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 BTG2P78543 158 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 ART3Q13508 389 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 TRIP13Q15645 432 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-219ENST00000556413 SGCBQ16585 318 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 HAGHQ16775 308 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 SLC5A12Q1EHB4 618 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 C18orf21Q32NC0 220 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-219ENST00000556413 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 FILIP1LQ4L180 1135 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 AARDQ4LEZ3 155 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 SFT2D3Q587I9 215 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 CMPK2Q5EBM0 449 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 ACSBG2Q5FVE4 666 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 FBXO48Q5FWF7 155 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 PTRHD1Q6GMV3 140 aaKnown RBP2.08□□□□□ -2.08
SCFD1-219ENST00000556413 ADNP2Q6IQ32 1131 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 LRRC8BQ6P9F7 803 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 UNC5DQ6UXZ4 953 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 H2AFVQ71UI9 128 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 NDUFAF7Q7L592 441 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 VN1R4Q7Z5H5 301 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 ANKRD37Q7Z713 158 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 PAQR7Q86WK9 346 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 CDKL3Q8IVW4 592 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-219ENST00000556413 ZNF561Q8N587 486 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 MDS2Q8NDY4 140 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 OR2L3Q8NG85 312 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 OR2L8Q8NGY9 312 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 OR4A16Q8NH70 328 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 OR5K2Q8NHB8 316 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 LINC01560Q8TB33 94 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 BRSK1Q8TDC3 778 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 CA5BP1Q8WTZ4 195 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 C1orf54Q8WWF1 131 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 SRSF12Q8WXF0 261 aaKnown RBP2.08□□□□□ -2.08
SCFD1-219ENST00000556413 BCL2L2Q92843 193 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-219ENST00000556413 PRAP1Q96NZ9 151 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 C19orf43Q9BQ61 176 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 FAM173AQ9BQD7 235 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 NMUR2Q9GZQ4 415 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 TSPYL1Q9H0U9 437 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 NHEJ1Q9H9Q4 299 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-219ENST00000556413 MCCC2Q9HCC0 563 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 MRPS30Q9NP92 439 aaKnown RBP2.08□□□□□ -2.08
SCFD1-219ENST00000556413 ESM1Q9NQ30 184 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 MIEF1Q9NQG6 463 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 FBXO6Q9NRD1 293 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-219ENST00000556413 CENPMQ9NSP4 180 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 NLE1Q9NVX2 485 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-219ENST00000556413 STMN3Q9NZ72 180 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 UVRAGQ9P2Y5 699 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 ZNF282Q9UDV7 671 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-219ENST00000556413 RNF115Q9Y4L5 304 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 WIF1Q9Y5W5 379 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 HEBP2Q9Y5Z4 205 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 AP1M2Q9Y6Q5 423 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 CENPEQ02224 2701 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 PIKFYVEQ9Y2I7 2098 aa2.08□□□□□ -2.08
SCFD1-219ENST00000556413 NUP210LQ5VU65 1888 aa2.07□□□□□ -2.08
SCFD1-219ENST00000556413 CCDC168Q8NDH2 2452 aa2.07□□□□□ -2.08
SCFD1-219ENST00000556413 IGLV3-16A0A075B6K0 115 aa2.07□□□□□ -2.08
SCFD1-219ENST00000556413 C17orf51A8MQB3 221 aa2.07□□□□□ -2.08
SCFD1-219ENST00000556413 EEF1E1-BLOC1S5C9J1V9 151 aa2.07□□□□□ -2.08
SCFD1-219ENST00000556413 GOLGA8MH3BSY2 632 aa2.07□□□□□ -2.08
SCFD1-219ENST00000556413 WWP2O00308 870 aa2.07□□□□□ -2.08
SCFD1-219ENST00000556413 NDC80O14777 642 aa2.07□□□□□ -2.08
SCFD1-219ENST00000556413 LIN7AO14910 233 aaPredicted RBP2.07□□□□□ -2.08
SCFD1-219ENST00000556413 EEF1E1O43324 174 aaKnown RBP2.07□□□□□ -2.08
SCFD1-219ENST00000556413 PSTPIP1O43586 416 aa2.07□□□□□ -2.08
SCFD1-219ENST00000556413 TYROBPO43914 113 aa2.07□□□□□ -2.08
SCFD1-219ENST00000556413 LCMT2O60294 686 aaKnown RBP2.07□□□□□ -2.08
SCFD1-219ENST00000556413 NME2P1O60361 137 aa2.07□□□□□ -2.08
SCFD1-219ENST00000556413 TOXO94900 526 aa2.07□□□□□ -2.08
SCFD1-219ENST00000556413 SLC2A10O95528 541 aa2.07□□□□□ -2.08
SCFD1-219ENST00000556413 C1orf105O95561 183 aa2.07□□□□□ -2.08
SCFD1-219ENST00000556413 TSPAN12O95859 305 aa2.07□□□□□ -2.08
SCFD1-219ENST00000556413 FTH1P02794 183 aa2.07□□□□□ -2.08
SCFD1-219ENST00000556413 PTMAP06454 111 aaKnown RBP2.07□□□□□ -2.08
SCFD1-219ENST00000556413 SNRPCP09234 159 aaKnown RBP2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms